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Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA
High-dimensional biomedical data contained many irrelevant or weakly correlated features, which affected the efficiency of disease diagnosis. This manuscript presented a feature selection method for high-dimensional biomedical data based on the chemotaxis foraging-shuffled frog leaping algorithm (BF...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9058075/ https://www.ncbi.nlm.nih.gov/pubmed/35509450 http://dx.doi.org/10.3389/fnins.2022.854685 |
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author | Dai, Yongqiang Niu, Lili Wei, Linjing Tang, Jie |
author_facet | Dai, Yongqiang Niu, Lili Wei, Linjing Tang, Jie |
author_sort | Dai, Yongqiang |
collection | PubMed |
description | High-dimensional biomedical data contained many irrelevant or weakly correlated features, which affected the efficiency of disease diagnosis. This manuscript presented a feature selection method for high-dimensional biomedical data based on the chemotaxis foraging-shuffled frog leaping algorithm (BF-SFLA). The performance of the BF-SFLA based feature selection method was further improved by introducing chemokine operation and balanced grouping strategies into the shuffled frog leaping algorithm, which maintained the balance between global optimization and local optimization and reduced the possibility of the algorithm falling into local optimization. To evaluate the proposed method’s effectiveness, we employed the K-NN (k-nearest Neighbor) and C4.5 decision tree classification algorithm with a comparative analysis. We compared our proposed approach with improved genetic algorithms, particle swarm optimization, and the basic shuffled frog leaping algorithm. Experimental results showed that the feature selection method based on BF-SFLA obtained a better feature subset, improved classification accuracy, and shortened classification time. |
format | Online Article Text |
id | pubmed-9058075 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-90580752022-05-03 Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA Dai, Yongqiang Niu, Lili Wei, Linjing Tang, Jie Front Neurosci Neuroscience High-dimensional biomedical data contained many irrelevant or weakly correlated features, which affected the efficiency of disease diagnosis. This manuscript presented a feature selection method for high-dimensional biomedical data based on the chemotaxis foraging-shuffled frog leaping algorithm (BF-SFLA). The performance of the BF-SFLA based feature selection method was further improved by introducing chemokine operation and balanced grouping strategies into the shuffled frog leaping algorithm, which maintained the balance between global optimization and local optimization and reduced the possibility of the algorithm falling into local optimization. To evaluate the proposed method’s effectiveness, we employed the K-NN (k-nearest Neighbor) and C4.5 decision tree classification algorithm with a comparative analysis. We compared our proposed approach with improved genetic algorithms, particle swarm optimization, and the basic shuffled frog leaping algorithm. Experimental results showed that the feature selection method based on BF-SFLA obtained a better feature subset, improved classification accuracy, and shortened classification time. Frontiers Media S.A. 2022-04-18 /pmc/articles/PMC9058075/ /pubmed/35509450 http://dx.doi.org/10.3389/fnins.2022.854685 Text en Copyright © 2022 Dai, Niu, Wei and Tang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Dai, Yongqiang Niu, Lili Wei, Linjing Tang, Jie Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA |
title | Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA |
title_full | Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA |
title_fullStr | Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA |
title_full_unstemmed | Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA |
title_short | Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA |
title_sort | feature selection in high dimensional biomedical data based on bf-sfla |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9058075/ https://www.ncbi.nlm.nih.gov/pubmed/35509450 http://dx.doi.org/10.3389/fnins.2022.854685 |
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