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Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA

High-dimensional biomedical data contained many irrelevant or weakly correlated features, which affected the efficiency of disease diagnosis. This manuscript presented a feature selection method for high-dimensional biomedical data based on the chemotaxis foraging-shuffled frog leaping algorithm (BF...

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Detalles Bibliográficos
Autores principales: Dai, Yongqiang, Niu, Lili, Wei, Linjing, Tang, Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9058075/
https://www.ncbi.nlm.nih.gov/pubmed/35509450
http://dx.doi.org/10.3389/fnins.2022.854685
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author Dai, Yongqiang
Niu, Lili
Wei, Linjing
Tang, Jie
author_facet Dai, Yongqiang
Niu, Lili
Wei, Linjing
Tang, Jie
author_sort Dai, Yongqiang
collection PubMed
description High-dimensional biomedical data contained many irrelevant or weakly correlated features, which affected the efficiency of disease diagnosis. This manuscript presented a feature selection method for high-dimensional biomedical data based on the chemotaxis foraging-shuffled frog leaping algorithm (BF-SFLA). The performance of the BF-SFLA based feature selection method was further improved by introducing chemokine operation and balanced grouping strategies into the shuffled frog leaping algorithm, which maintained the balance between global optimization and local optimization and reduced the possibility of the algorithm falling into local optimization. To evaluate the proposed method’s effectiveness, we employed the K-NN (k-nearest Neighbor) and C4.5 decision tree classification algorithm with a comparative analysis. We compared our proposed approach with improved genetic algorithms, particle swarm optimization, and the basic shuffled frog leaping algorithm. Experimental results showed that the feature selection method based on BF-SFLA obtained a better feature subset, improved classification accuracy, and shortened classification time.
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spelling pubmed-90580752022-05-03 Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA Dai, Yongqiang Niu, Lili Wei, Linjing Tang, Jie Front Neurosci Neuroscience High-dimensional biomedical data contained many irrelevant or weakly correlated features, which affected the efficiency of disease diagnosis. This manuscript presented a feature selection method for high-dimensional biomedical data based on the chemotaxis foraging-shuffled frog leaping algorithm (BF-SFLA). The performance of the BF-SFLA based feature selection method was further improved by introducing chemokine operation and balanced grouping strategies into the shuffled frog leaping algorithm, which maintained the balance between global optimization and local optimization and reduced the possibility of the algorithm falling into local optimization. To evaluate the proposed method’s effectiveness, we employed the K-NN (k-nearest Neighbor) and C4.5 decision tree classification algorithm with a comparative analysis. We compared our proposed approach with improved genetic algorithms, particle swarm optimization, and the basic shuffled frog leaping algorithm. Experimental results showed that the feature selection method based on BF-SFLA obtained a better feature subset, improved classification accuracy, and shortened classification time. Frontiers Media S.A. 2022-04-18 /pmc/articles/PMC9058075/ /pubmed/35509450 http://dx.doi.org/10.3389/fnins.2022.854685 Text en Copyright © 2022 Dai, Niu, Wei and Tang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Dai, Yongqiang
Niu, Lili
Wei, Linjing
Tang, Jie
Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA
title Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA
title_full Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA
title_fullStr Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA
title_full_unstemmed Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA
title_short Feature Selection in High Dimensional Biomedical Data Based on BF-SFLA
title_sort feature selection in high dimensional biomedical data based on bf-sfla
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9058075/
https://www.ncbi.nlm.nih.gov/pubmed/35509450
http://dx.doi.org/10.3389/fnins.2022.854685
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