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Experimental and theoretical investigation of intramolecular cooperativity in cyclic benzene trimer motif
A series of new symmetrical tripodal molecules 1a–4b with a central benzene scaffold substituted with methyl/ethyl groups and three benzimidazolyl units having a bithiophene/biphenyl/5-alkylthiophene motif at the 2-position via a –CH(2)– unit were synthesized and characterized by elemental analysis,...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9059549/ https://www.ncbi.nlm.nih.gov/pubmed/35517582 http://dx.doi.org/10.1039/c8ra06647g |
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author | Kumar, Chakka Kiran Deval Sathiyashivan, Shankar Masram, Dhanraj T. Jose, K. V. Jovan Sathiyendiran, Malaichamy |
author_facet | Kumar, Chakka Kiran Deval Sathiyashivan, Shankar Masram, Dhanraj T. Jose, K. V. Jovan Sathiyendiran, Malaichamy |
author_sort | Kumar, Chakka Kiran |
collection | PubMed |
description | A series of new symmetrical tripodal molecules 1a–4b with a central benzene scaffold substituted with methyl/ethyl groups and three benzimidazolyl units having a bithiophene/biphenyl/5-alkylthiophene motif at the 2-position via a –CH(2)– unit were synthesized and characterized by elemental analysis, HR-MS, and NMR spectroscopy. NMR spectral data reveal that all molecules adopt a cyclic benzene trimer (CBT) using three benzimidazolyl units. Intramolecular cooperative edge-to-face C–H⋯π interactions stabilize the CBT motif in solution and are strong in ethyl substituted molecules (1b–4b) compared to methyl substituted (1a–4a) ones. However, the strength of the CBT unit in the tripodal molecule is independent of the length of the substituent at the 2-position of the benzimidazolyl unit. The relative (1)H NMR chemical shift calculated at the MPW1PW91/6-311+G(d,p) level of theory corroborates the experimental values, and the calculations predict the distribution of the structures into syn isomers. The relative change in the NMR chemical shift is justified by the relative change in the magnitude of the (3,+3) critical point (CP) in the molecular electrostatic potential (MESP) topography. Also, a linear correlation of the intramolecular C–H⋯π interactions evaluated at M062X/6-311+G(d,p) with the relative NMR chemical shift suggest the latter as a measure of intramolecular cooperativity. |
format | Online Article Text |
id | pubmed-9059549 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-90595492022-05-04 Experimental and theoretical investigation of intramolecular cooperativity in cyclic benzene trimer motif Kumar, Chakka Kiran Deval Sathiyashivan, Shankar Masram, Dhanraj T. Jose, K. V. Jovan Sathiyendiran, Malaichamy RSC Adv Chemistry A series of new symmetrical tripodal molecules 1a–4b with a central benzene scaffold substituted with methyl/ethyl groups and three benzimidazolyl units having a bithiophene/biphenyl/5-alkylthiophene motif at the 2-position via a –CH(2)– unit were synthesized and characterized by elemental analysis, HR-MS, and NMR spectroscopy. NMR spectral data reveal that all molecules adopt a cyclic benzene trimer (CBT) using three benzimidazolyl units. Intramolecular cooperative edge-to-face C–H⋯π interactions stabilize the CBT motif in solution and are strong in ethyl substituted molecules (1b–4b) compared to methyl substituted (1a–4a) ones. However, the strength of the CBT unit in the tripodal molecule is independent of the length of the substituent at the 2-position of the benzimidazolyl unit. The relative (1)H NMR chemical shift calculated at the MPW1PW91/6-311+G(d,p) level of theory corroborates the experimental values, and the calculations predict the distribution of the structures into syn isomers. The relative change in the NMR chemical shift is justified by the relative change in the magnitude of the (3,+3) critical point (CP) in the molecular electrostatic potential (MESP) topography. Also, a linear correlation of the intramolecular C–H⋯π interactions evaluated at M062X/6-311+G(d,p) with the relative NMR chemical shift suggest the latter as a measure of intramolecular cooperativity. The Royal Society of Chemistry 2019-01-04 /pmc/articles/PMC9059549/ /pubmed/35517582 http://dx.doi.org/10.1039/c8ra06647g Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Kumar, Chakka Kiran Deval Sathiyashivan, Shankar Masram, Dhanraj T. Jose, K. V. Jovan Sathiyendiran, Malaichamy Experimental and theoretical investigation of intramolecular cooperativity in cyclic benzene trimer motif |
title | Experimental and theoretical investigation of intramolecular cooperativity in cyclic benzene trimer motif |
title_full | Experimental and theoretical investigation of intramolecular cooperativity in cyclic benzene trimer motif |
title_fullStr | Experimental and theoretical investigation of intramolecular cooperativity in cyclic benzene trimer motif |
title_full_unstemmed | Experimental and theoretical investigation of intramolecular cooperativity in cyclic benzene trimer motif |
title_short | Experimental and theoretical investigation of intramolecular cooperativity in cyclic benzene trimer motif |
title_sort | experimental and theoretical investigation of intramolecular cooperativity in cyclic benzene trimer motif |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9059549/ https://www.ncbi.nlm.nih.gov/pubmed/35517582 http://dx.doi.org/10.1039/c8ra06647g |
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