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Genome sequence data of Lactiplantibacillus plantarum IMI 507028

Here, we report the genome sequencing data for the fermented milk isolate, Lactiplantibacillus plantarum (L. plantarum) IMI 507028. The Bioproject, SRA, and GenBank data were deposited at NCBI under accession numbers PRJNA801616, SRR18323693, and JAKMAX000000000, respectively. The size of the genome...

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Autores principales: Nikodinoska, Ivana, Makkonen, Jenny, Blande, Daniel, Moran, Colm
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9062256/
https://www.ncbi.nlm.nih.gov/pubmed/35515993
http://dx.doi.org/10.1016/j.dib.2022.108190
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author Nikodinoska, Ivana
Makkonen, Jenny
Blande, Daniel
Moran, Colm
author_facet Nikodinoska, Ivana
Makkonen, Jenny
Blande, Daniel
Moran, Colm
author_sort Nikodinoska, Ivana
collection PubMed
description Here, we report the genome sequencing data for the fermented milk isolate, Lactiplantibacillus plantarum (L. plantarum) IMI 507028. The Bioproject, SRA, and GenBank data were deposited at NCBI under accession numbers PRJNA801616, SRR18323693, and JAKMAX000000000, respectively. The size of the genome was 3,231,321 bp, with a GC% of 44.52. Before sequence trimming, the genome contained 40 contigs, in which 35 contigs were annotated, revealing 2937 coding sequences out of 3052 total genes. The strain was identified as L. plantarum with an average nucleotide identity (ANI) value of 99.9922% between IMI 507028 and L. plantarum JDM1. Genes related to antimicrobial resistance or pathogenic factors were not found during screening.
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spelling pubmed-90622562022-05-04 Genome sequence data of Lactiplantibacillus plantarum IMI 507028 Nikodinoska, Ivana Makkonen, Jenny Blande, Daniel Moran, Colm Data Brief Data Article Here, we report the genome sequencing data for the fermented milk isolate, Lactiplantibacillus plantarum (L. plantarum) IMI 507028. The Bioproject, SRA, and GenBank data were deposited at NCBI under accession numbers PRJNA801616, SRR18323693, and JAKMAX000000000, respectively. The size of the genome was 3,231,321 bp, with a GC% of 44.52. Before sequence trimming, the genome contained 40 contigs, in which 35 contigs were annotated, revealing 2937 coding sequences out of 3052 total genes. The strain was identified as L. plantarum with an average nucleotide identity (ANI) value of 99.9922% between IMI 507028 and L. plantarum JDM1. Genes related to antimicrobial resistance or pathogenic factors were not found during screening. Elsevier 2022-04-19 /pmc/articles/PMC9062256/ /pubmed/35515993 http://dx.doi.org/10.1016/j.dib.2022.108190 Text en © 2022 The Author(s). Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Nikodinoska, Ivana
Makkonen, Jenny
Blande, Daniel
Moran, Colm
Genome sequence data of Lactiplantibacillus plantarum IMI 507028
title Genome sequence data of Lactiplantibacillus plantarum IMI 507028
title_full Genome sequence data of Lactiplantibacillus plantarum IMI 507028
title_fullStr Genome sequence data of Lactiplantibacillus plantarum IMI 507028
title_full_unstemmed Genome sequence data of Lactiplantibacillus plantarum IMI 507028
title_short Genome sequence data of Lactiplantibacillus plantarum IMI 507028
title_sort genome sequence data of lactiplantibacillus plantarum imi 507028
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9062256/
https://www.ncbi.nlm.nih.gov/pubmed/35515993
http://dx.doi.org/10.1016/j.dib.2022.108190
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