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Validation of a computational chain from PET Monte Carlo simulations to reconstructed images

The study aimed to create a pipeline from Monte Carlo simulated projections of a Gate PET system to reconstructed images. The PET system was modelled after the GE Discovery MI (DMI) PET/CT, and the simulated projections were reconstructed with the stand-alone reconstruction software CASToR. Attenuat...

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Autores principales: Kalaitzidis, Philip, Gustafsson, Johan, Hindorf, Cecilia, Ljungberg, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9062260/
https://www.ncbi.nlm.nih.gov/pubmed/35520630
http://dx.doi.org/10.1016/j.heliyon.2022.e09316
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author Kalaitzidis, Philip
Gustafsson, Johan
Hindorf, Cecilia
Ljungberg, Michael
author_facet Kalaitzidis, Philip
Gustafsson, Johan
Hindorf, Cecilia
Ljungberg, Michael
author_sort Kalaitzidis, Philip
collection PubMed
description The study aimed to create a pipeline from Monte Carlo simulated projections of a Gate PET system to reconstructed images. The PET system was modelled after the GE Discovery MI (DMI) PET/CT, and the simulated projections were reconstructed with the stand-alone reconstruction software CASToR. Attenuation correction, normalisation calibration, random estimation, and scatter estimation for the simulations were computed with in-house programs. The pipeline was compared in both projection and image space with data acquired on a clinical DMI and reconstructed with GE's off-line PET reconstruction software (PET Toolbox) and CASToR. The simulated and measured data were compared for the number of prompt coincidences, scatter fraction, contrast recovery coefficient (CRC), signal-to-noise ratio (SNR), background variability, residual lung error, and image profiles. A slight discrepancy was noted in the projection space, but good agreements were generally achieved in image space between simulated and measured data. The CRC was found to be 81 % for Gate – CASToR, 84 % for GE – CASToR, and 84 % for GE - PET Toolbox for the largest sphere of the NEMA image quality (IQ) phantom, and the SNR was found to be 98 for Gate – CASToR, 91 for GE – CASToR, and 93 for GE – PET Toolbox. Profiles drawn over the spheres for the NEMA IQ phantom and the Data Spectrum (DS) phantom show a good match between measurement and simulation. The results indicate feasibility to utilise the pipeline as a tool for off-line simulation-based studies. A complete pipeline introduces possibilities to study the impact of single parameters in the whole chain from simulation to reconstructed images.
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spelling pubmed-90622602022-05-04 Validation of a computational chain from PET Monte Carlo simulations to reconstructed images Kalaitzidis, Philip Gustafsson, Johan Hindorf, Cecilia Ljungberg, Michael Heliyon Research Article The study aimed to create a pipeline from Monte Carlo simulated projections of a Gate PET system to reconstructed images. The PET system was modelled after the GE Discovery MI (DMI) PET/CT, and the simulated projections were reconstructed with the stand-alone reconstruction software CASToR. Attenuation correction, normalisation calibration, random estimation, and scatter estimation for the simulations were computed with in-house programs. The pipeline was compared in both projection and image space with data acquired on a clinical DMI and reconstructed with GE's off-line PET reconstruction software (PET Toolbox) and CASToR. The simulated and measured data were compared for the number of prompt coincidences, scatter fraction, contrast recovery coefficient (CRC), signal-to-noise ratio (SNR), background variability, residual lung error, and image profiles. A slight discrepancy was noted in the projection space, but good agreements were generally achieved in image space between simulated and measured data. The CRC was found to be 81 % for Gate – CASToR, 84 % for GE – CASToR, and 84 % for GE - PET Toolbox for the largest sphere of the NEMA image quality (IQ) phantom, and the SNR was found to be 98 for Gate – CASToR, 91 for GE – CASToR, and 93 for GE – PET Toolbox. Profiles drawn over the spheres for the NEMA IQ phantom and the Data Spectrum (DS) phantom show a good match between measurement and simulation. The results indicate feasibility to utilise the pipeline as a tool for off-line simulation-based studies. A complete pipeline introduces possibilities to study the impact of single parameters in the whole chain from simulation to reconstructed images. Elsevier 2022-04-21 /pmc/articles/PMC9062260/ /pubmed/35520630 http://dx.doi.org/10.1016/j.heliyon.2022.e09316 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Research Article
Kalaitzidis, Philip
Gustafsson, Johan
Hindorf, Cecilia
Ljungberg, Michael
Validation of a computational chain from PET Monte Carlo simulations to reconstructed images
title Validation of a computational chain from PET Monte Carlo simulations to reconstructed images
title_full Validation of a computational chain from PET Monte Carlo simulations to reconstructed images
title_fullStr Validation of a computational chain from PET Monte Carlo simulations to reconstructed images
title_full_unstemmed Validation of a computational chain from PET Monte Carlo simulations to reconstructed images
title_short Validation of a computational chain from PET Monte Carlo simulations to reconstructed images
title_sort validation of a computational chain from pet monte carlo simulations to reconstructed images
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9062260/
https://www.ncbi.nlm.nih.gov/pubmed/35520630
http://dx.doi.org/10.1016/j.heliyon.2022.e09316
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