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Systematic analysis of prognostic significance, functional enrichment and immune implication of STK10 in acute myeloid leukemia
BACKGROUND: Despite deeper understanding of the genetic landscape of acute myeloid leukemia (AML), the improvement of survival is still a great challenge. STK10 is overexpressed in several cancers with functions varying according to cancer types. But the functions of STK10 in AML has never been repo...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9063138/ https://www.ncbi.nlm.nih.gov/pubmed/35501867 http://dx.doi.org/10.1186/s12920-022-01251-7 |
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author | Bi, Lei Jia, Shuangshuang Hu, Wuyue Su, Xiaoli Chen, Xiequn Tang, Hailong |
author_facet | Bi, Lei Jia, Shuangshuang Hu, Wuyue Su, Xiaoli Chen, Xiequn Tang, Hailong |
author_sort | Bi, Lei |
collection | PubMed |
description | BACKGROUND: Despite deeper understanding of the genetic landscape of acute myeloid leukemia (AML), the improvement of survival is still a great challenge. STK10 is overexpressed in several cancers with functions varying according to cancer types. But the functions of STK10 in AML has never been reported. METHODS: We analyzed the expression, prognosis and potential functions of STK10 utilizing public web servers. Metascape and the String database were used for functional and protein–protein interaction analyses. RESULTS: We found STK10 was enriched in blood & immune cells and overexpressed in AML. High STK10 expression was associated with poor overall survival, which was also identified in the subgroups of patients ≤ 60 years old and patients with non-high-risk cytogenetics. We demonstrated genes associated with STK10 were enriched in blood, spleen and bone marrow, influencing the immune function and biological process of AML. ITGB2 and ITGAM might directly interact with STK10 and were associated with poor prognosis. Besides, STK10 was associated with the infiltration of immune cells and immune checkpoints, like HLA-E, CD274 and GAL-9. CONCLUSIONS: The present study was the original description of STK10 in AML and set the stage for developing STK10 as a new prognostic marker or therapeutic target for AML. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12920-022-01251-7. |
format | Online Article Text |
id | pubmed-9063138 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-90631382022-05-04 Systematic analysis of prognostic significance, functional enrichment and immune implication of STK10 in acute myeloid leukemia Bi, Lei Jia, Shuangshuang Hu, Wuyue Su, Xiaoli Chen, Xiequn Tang, Hailong BMC Med Genomics Research BACKGROUND: Despite deeper understanding of the genetic landscape of acute myeloid leukemia (AML), the improvement of survival is still a great challenge. STK10 is overexpressed in several cancers with functions varying according to cancer types. But the functions of STK10 in AML has never been reported. METHODS: We analyzed the expression, prognosis and potential functions of STK10 utilizing public web servers. Metascape and the String database were used for functional and protein–protein interaction analyses. RESULTS: We found STK10 was enriched in blood & immune cells and overexpressed in AML. High STK10 expression was associated with poor overall survival, which was also identified in the subgroups of patients ≤ 60 years old and patients with non-high-risk cytogenetics. We demonstrated genes associated with STK10 were enriched in blood, spleen and bone marrow, influencing the immune function and biological process of AML. ITGB2 and ITGAM might directly interact with STK10 and were associated with poor prognosis. Besides, STK10 was associated with the infiltration of immune cells and immune checkpoints, like HLA-E, CD274 and GAL-9. CONCLUSIONS: The present study was the original description of STK10 in AML and set the stage for developing STK10 as a new prognostic marker or therapeutic target for AML. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12920-022-01251-7. BioMed Central 2022-05-01 /pmc/articles/PMC9063138/ /pubmed/35501867 http://dx.doi.org/10.1186/s12920-022-01251-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Bi, Lei Jia, Shuangshuang Hu, Wuyue Su, Xiaoli Chen, Xiequn Tang, Hailong Systematic analysis of prognostic significance, functional enrichment and immune implication of STK10 in acute myeloid leukemia |
title | Systematic analysis of prognostic significance, functional enrichment and immune implication of STK10 in acute myeloid leukemia |
title_full | Systematic analysis of prognostic significance, functional enrichment and immune implication of STK10 in acute myeloid leukemia |
title_fullStr | Systematic analysis of prognostic significance, functional enrichment and immune implication of STK10 in acute myeloid leukemia |
title_full_unstemmed | Systematic analysis of prognostic significance, functional enrichment and immune implication of STK10 in acute myeloid leukemia |
title_short | Systematic analysis of prognostic significance, functional enrichment and immune implication of STK10 in acute myeloid leukemia |
title_sort | systematic analysis of prognostic significance, functional enrichment and immune implication of stk10 in acute myeloid leukemia |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9063138/ https://www.ncbi.nlm.nih.gov/pubmed/35501867 http://dx.doi.org/10.1186/s12920-022-01251-7 |
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