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Wheat grain width: a clue for re-exploring visual indicators of grain weight
BACKGROUND: Mean grain weight (MGW) is among the most frequently measured parameters in wheat breeding and physiology. Although in the recent decades, various wheat grain analyses (e.g. counting, and determining the size, color, or shape features) have been facilitated, thanks to the automated image...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9063171/ https://www.ncbi.nlm.nih.gov/pubmed/35505376 http://dx.doi.org/10.1186/s13007-022-00891-1 |
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author | Haghshenas, Abbas Emam, Yahya Jafarizadeh, Saeid |
author_facet | Haghshenas, Abbas Emam, Yahya Jafarizadeh, Saeid |
author_sort | Haghshenas, Abbas |
collection | PubMed |
description | BACKGROUND: Mean grain weight (MGW) is among the most frequently measured parameters in wheat breeding and physiology. Although in the recent decades, various wheat grain analyses (e.g. counting, and determining the size, color, or shape features) have been facilitated, thanks to the automated image processing systems, MGW estimations have been limited to using few number of image-derived indices; i.e. mainly the linear or power models developed based on the projected area (Area). Following a preliminary observation which indicated the potential of grain width in improving the predictions, the present study was conducted to explore more efficient indices for increasing the precision of image-based MGW estimations. For this purpose, an image archive of the grains was processed, which were harvested from a 2-year field experiment carried out with 3 replicates under two irrigation conditions and included 15 cultivar mixture treatments (so the archive was consisted of 180 images including more than 72,000 grains). RESULTS: It was observed that among the more than 30 evaluated indices of grain size and shape, indicators of grain width (i.e. Minor & MinFeret) along with 8 other empirical indices had a higher correlation with MGW, compared with Area. The most precise MGW predictions were obtained using the Area × Circularity, Perimeter × Circularity, and Area/Perimeter indices. Furthermore, it was found that (i) grain width and the Area/Perimeter ratio were the common factors in the structure of the superior predictive indices; and (ii) the superior indices had the highest correlation with grain width, rather than with their mathematical components. Moreover, comparative efficiency of the superior indices almost remained stable across the 4 environmental conditions. Eventually, using the selected indices, ten simple linear models were developed and validated for MGW prediction, which indicated a relatively higher precision than the current Area-based models. The considerable effect of enhancing image resolution on the precision of the models has been also evidenced. CONCLUSIONS: It is expected that the findings of the present study, along with the simple predictive linear models developed and validated using new image-derived indices, could improve the precision of the image-based MGW estimations, and consequently facilitate wheat breeding and physiological assessments. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13007-022-00891-1. |
format | Online Article Text |
id | pubmed-9063171 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-90631712022-05-04 Wheat grain width: a clue for re-exploring visual indicators of grain weight Haghshenas, Abbas Emam, Yahya Jafarizadeh, Saeid Plant Methods Research BACKGROUND: Mean grain weight (MGW) is among the most frequently measured parameters in wheat breeding and physiology. Although in the recent decades, various wheat grain analyses (e.g. counting, and determining the size, color, or shape features) have been facilitated, thanks to the automated image processing systems, MGW estimations have been limited to using few number of image-derived indices; i.e. mainly the linear or power models developed based on the projected area (Area). Following a preliminary observation which indicated the potential of grain width in improving the predictions, the present study was conducted to explore more efficient indices for increasing the precision of image-based MGW estimations. For this purpose, an image archive of the grains was processed, which were harvested from a 2-year field experiment carried out with 3 replicates under two irrigation conditions and included 15 cultivar mixture treatments (so the archive was consisted of 180 images including more than 72,000 grains). RESULTS: It was observed that among the more than 30 evaluated indices of grain size and shape, indicators of grain width (i.e. Minor & MinFeret) along with 8 other empirical indices had a higher correlation with MGW, compared with Area. The most precise MGW predictions were obtained using the Area × Circularity, Perimeter × Circularity, and Area/Perimeter indices. Furthermore, it was found that (i) grain width and the Area/Perimeter ratio were the common factors in the structure of the superior predictive indices; and (ii) the superior indices had the highest correlation with grain width, rather than with their mathematical components. Moreover, comparative efficiency of the superior indices almost remained stable across the 4 environmental conditions. Eventually, using the selected indices, ten simple linear models were developed and validated for MGW prediction, which indicated a relatively higher precision than the current Area-based models. The considerable effect of enhancing image resolution on the precision of the models has been also evidenced. CONCLUSIONS: It is expected that the findings of the present study, along with the simple predictive linear models developed and validated using new image-derived indices, could improve the precision of the image-based MGW estimations, and consequently facilitate wheat breeding and physiological assessments. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13007-022-00891-1. BioMed Central 2022-05-03 /pmc/articles/PMC9063171/ /pubmed/35505376 http://dx.doi.org/10.1186/s13007-022-00891-1 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Haghshenas, Abbas Emam, Yahya Jafarizadeh, Saeid Wheat grain width: a clue for re-exploring visual indicators of grain weight |
title | Wheat grain width: a clue for re-exploring visual indicators of grain weight |
title_full | Wheat grain width: a clue for re-exploring visual indicators of grain weight |
title_fullStr | Wheat grain width: a clue for re-exploring visual indicators of grain weight |
title_full_unstemmed | Wheat grain width: a clue for re-exploring visual indicators of grain weight |
title_short | Wheat grain width: a clue for re-exploring visual indicators of grain weight |
title_sort | wheat grain width: a clue for re-exploring visual indicators of grain weight |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9063171/ https://www.ncbi.nlm.nih.gov/pubmed/35505376 http://dx.doi.org/10.1186/s13007-022-00891-1 |
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