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Solving the enigma of weak fluorine contacts in the solid state: a periodic DFT study of fluorinated organic crystals
The nature and strength of weak interactions with organic fluorine in the solid state are revealed by periodic density functional theory (periodic DFT) calculations coupled with experimental data on the structure and sublimation thermodynamics of crystalline organofluorine compounds. To minimize oth...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9063672/ https://www.ncbi.nlm.nih.gov/pubmed/35515880 http://dx.doi.org/10.1039/c9ra02116g |
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author | Levina, Elena O. Chernyshov, Ivan Y. Voronin, Alexander P. Alekseiko, Leonid N. Stash, Adam I. Vener, Mikhail V. |
author_facet | Levina, Elena O. Chernyshov, Ivan Y. Voronin, Alexander P. Alekseiko, Leonid N. Stash, Adam I. Vener, Mikhail V. |
author_sort | Levina, Elena O. |
collection | PubMed |
description | The nature and strength of weak interactions with organic fluorine in the solid state are revealed by periodic density functional theory (periodic DFT) calculations coupled with experimental data on the structure and sublimation thermodynamics of crystalline organofluorine compounds. To minimize other intermolecular interactions, several sets of crystals of perfluorinated and partially fluorinated organic molecules are considered. This allows us to establish the theoretical levels providing an adequate description of the metric and electron-density parameters of the C–F⋯F–C interactions and the sublimation enthalpy of crystalline perfluorinated compounds. A detailed comparison of the C–F⋯F–C and C–H⋯F–C interactions is performed using the relaxed molecular geometry in the studied crystals. The change in the crystalline packing of aromatic compounds during their partial fluorination points to the structure-directing role of C–H⋯F–C interactions due to the dominant electrostatic contribution to these contacts. C–H⋯F–C and C–H⋯O interactions are found to be identical in nature and comparable in energy. The factors that determine the contribution of these interactions to the crystal packing are revealed. The reliability of the results is confirmed by considering the superposition of the electrostatic potential and electron density gradient fields in the area of the investigated intermolecular interactions. |
format | Online Article Text |
id | pubmed-9063672 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-90636722022-05-04 Solving the enigma of weak fluorine contacts in the solid state: a periodic DFT study of fluorinated organic crystals Levina, Elena O. Chernyshov, Ivan Y. Voronin, Alexander P. Alekseiko, Leonid N. Stash, Adam I. Vener, Mikhail V. RSC Adv Chemistry The nature and strength of weak interactions with organic fluorine in the solid state are revealed by periodic density functional theory (periodic DFT) calculations coupled with experimental data on the structure and sublimation thermodynamics of crystalline organofluorine compounds. To minimize other intermolecular interactions, several sets of crystals of perfluorinated and partially fluorinated organic molecules are considered. This allows us to establish the theoretical levels providing an adequate description of the metric and electron-density parameters of the C–F⋯F–C interactions and the sublimation enthalpy of crystalline perfluorinated compounds. A detailed comparison of the C–F⋯F–C and C–H⋯F–C interactions is performed using the relaxed molecular geometry in the studied crystals. The change in the crystalline packing of aromatic compounds during their partial fluorination points to the structure-directing role of C–H⋯F–C interactions due to the dominant electrostatic contribution to these contacts. C–H⋯F–C and C–H⋯O interactions are found to be identical in nature and comparable in energy. The factors that determine the contribution of these interactions to the crystal packing are revealed. The reliability of the results is confirmed by considering the superposition of the electrostatic potential and electron density gradient fields in the area of the investigated intermolecular interactions. The Royal Society of Chemistry 2019-04-23 /pmc/articles/PMC9063672/ /pubmed/35515880 http://dx.doi.org/10.1039/c9ra02116g Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Levina, Elena O. Chernyshov, Ivan Y. Voronin, Alexander P. Alekseiko, Leonid N. Stash, Adam I. Vener, Mikhail V. Solving the enigma of weak fluorine contacts in the solid state: a periodic DFT study of fluorinated organic crystals |
title | Solving the enigma of weak fluorine contacts in the solid state: a periodic DFT study of fluorinated organic crystals |
title_full | Solving the enigma of weak fluorine contacts in the solid state: a periodic DFT study of fluorinated organic crystals |
title_fullStr | Solving the enigma of weak fluorine contacts in the solid state: a periodic DFT study of fluorinated organic crystals |
title_full_unstemmed | Solving the enigma of weak fluorine contacts in the solid state: a periodic DFT study of fluorinated organic crystals |
title_short | Solving the enigma of weak fluorine contacts in the solid state: a periodic DFT study of fluorinated organic crystals |
title_sort | solving the enigma of weak fluorine contacts in the solid state: a periodic dft study of fluorinated organic crystals |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9063672/ https://www.ncbi.nlm.nih.gov/pubmed/35515880 http://dx.doi.org/10.1039/c9ra02116g |
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