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A circular RNA circ_0000115 in response to graphene oxide in nematodes
Circular RNAs (circRNAs) play important roles in regulating various biological processes; however, their roles in regulating the toxicity of engineered nanomaterials (ENMs) are still unclear. Based on Illumina HiSeq2500 sequencing, we here identified 43 dysregulated circRNAs in graphene oxide (GO) (...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9063864/ https://www.ncbi.nlm.nih.gov/pubmed/35519596 http://dx.doi.org/10.1039/c9ra00997c |
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author | Shi, Lifang Jia, Xiaohuan Guo, Tiantian Cheng, Lu Han, Xiaoxiao Wu, Qiuli Wang, Dayong |
author_facet | Shi, Lifang Jia, Xiaohuan Guo, Tiantian Cheng, Lu Han, Xiaoxiao Wu, Qiuli Wang, Dayong |
author_sort | Shi, Lifang |
collection | PubMed |
description | Circular RNAs (circRNAs) play important roles in regulating various biological processes; however, their roles in regulating the toxicity of engineered nanomaterials (ENMs) are still unclear. Based on Illumina HiSeq2500 sequencing, we here identified 43 dysregulated circRNAs in graphene oxide (GO) (1 mg L(−1)) exposed nematodes. Five of these candidate circRNAs could be further dysregulated by GO exposure in the range of μg L(−1). Using the RNA interference (RNAi) technique, we found that the alteration in expressions of circ_0000115, circ_0000247, and circ_0000665 mediated a protective response to GO exposure; however, the alteration in expressions of circ_0000201 and circ_0000308 mediated the toxicity induction of GO. In nematodes, the circ_0000115 acted in certain tissues (intestine and neurons) to regulate GO toxicity. Moreover, an intermediate filament protein IFC-2 required for intestinal development was identified as a target of circ_0000115 in regulating the GO toxicity. In the intestine, intestinal IFC-2 acted further upstream of FOXO transcriptional factor DAF-16 in the insulin signaling pathway to regulate the GO toxicity. Therefore, intestinal circ_0000115 in the signaling cascade of circ_0000115-IFC-2-DAF-16 regulates the GO toxicity by modulating the function of IFC-2. |
format | Online Article Text |
id | pubmed-9063864 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-90638642022-05-04 A circular RNA circ_0000115 in response to graphene oxide in nematodes Shi, Lifang Jia, Xiaohuan Guo, Tiantian Cheng, Lu Han, Xiaoxiao Wu, Qiuli Wang, Dayong RSC Adv Chemistry Circular RNAs (circRNAs) play important roles in regulating various biological processes; however, their roles in regulating the toxicity of engineered nanomaterials (ENMs) are still unclear. Based on Illumina HiSeq2500 sequencing, we here identified 43 dysregulated circRNAs in graphene oxide (GO) (1 mg L(−1)) exposed nematodes. Five of these candidate circRNAs could be further dysregulated by GO exposure in the range of μg L(−1). Using the RNA interference (RNAi) technique, we found that the alteration in expressions of circ_0000115, circ_0000247, and circ_0000665 mediated a protective response to GO exposure; however, the alteration in expressions of circ_0000201 and circ_0000308 mediated the toxicity induction of GO. In nematodes, the circ_0000115 acted in certain tissues (intestine and neurons) to regulate GO toxicity. Moreover, an intermediate filament protein IFC-2 required for intestinal development was identified as a target of circ_0000115 in regulating the GO toxicity. In the intestine, intestinal IFC-2 acted further upstream of FOXO transcriptional factor DAF-16 in the insulin signaling pathway to regulate the GO toxicity. Therefore, intestinal circ_0000115 in the signaling cascade of circ_0000115-IFC-2-DAF-16 regulates the GO toxicity by modulating the function of IFC-2. The Royal Society of Chemistry 2019-05-03 /pmc/articles/PMC9063864/ /pubmed/35519596 http://dx.doi.org/10.1039/c9ra00997c Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Shi, Lifang Jia, Xiaohuan Guo, Tiantian Cheng, Lu Han, Xiaoxiao Wu, Qiuli Wang, Dayong A circular RNA circ_0000115 in response to graphene oxide in nematodes |
title | A circular RNA circ_0000115 in response to graphene oxide in nematodes |
title_full | A circular RNA circ_0000115 in response to graphene oxide in nematodes |
title_fullStr | A circular RNA circ_0000115 in response to graphene oxide in nematodes |
title_full_unstemmed | A circular RNA circ_0000115 in response to graphene oxide in nematodes |
title_short | A circular RNA circ_0000115 in response to graphene oxide in nematodes |
title_sort | circular rna circ_0000115 in response to graphene oxide in nematodes |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9063864/ https://www.ncbi.nlm.nih.gov/pubmed/35519596 http://dx.doi.org/10.1039/c9ra00997c |
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