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A game changer for bipolar disorder diagnosis using RNA editing-based biomarkers

In clinical practice, differentiating Bipolar Disorder (BD) from unipolar depression is a challenge due to the depressive symptoms, which are the core presentations of both disorders. This misdiagnosis during depressive episodes results in a delay in proper treatment and a poor management of their c...

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Autores principales: Salvetat, Nicolas, Checa-Robles, Francisco Jesus, Patel, Vipul, Cayzac, Christopher, Dubuc, Benjamin, Chimienti, Fabrice, Abraham, Jean-Daniel, Dupré, Pierrick, Vetter, Diana, Méreuze, Sandie, Lang, Jean-Philippe, Kupfer, David J., Courtet, Philippe, Weissmann, Dinah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9064541/
https://www.ncbi.nlm.nih.gov/pubmed/35504874
http://dx.doi.org/10.1038/s41398-022-01938-6
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author Salvetat, Nicolas
Checa-Robles, Francisco Jesus
Patel, Vipul
Cayzac, Christopher
Dubuc, Benjamin
Chimienti, Fabrice
Abraham, Jean-Daniel
Dupré, Pierrick
Vetter, Diana
Méreuze, Sandie
Lang, Jean-Philippe
Kupfer, David J.
Courtet, Philippe
Weissmann, Dinah
author_facet Salvetat, Nicolas
Checa-Robles, Francisco Jesus
Patel, Vipul
Cayzac, Christopher
Dubuc, Benjamin
Chimienti, Fabrice
Abraham, Jean-Daniel
Dupré, Pierrick
Vetter, Diana
Méreuze, Sandie
Lang, Jean-Philippe
Kupfer, David J.
Courtet, Philippe
Weissmann, Dinah
author_sort Salvetat, Nicolas
collection PubMed
description In clinical practice, differentiating Bipolar Disorder (BD) from unipolar depression is a challenge due to the depressive symptoms, which are the core presentations of both disorders. This misdiagnosis during depressive episodes results in a delay in proper treatment and a poor management of their condition. In a first step, using A-to-I RNA editome analysis, we discovered 646 variants (366 genes) differentially edited between depressed patients and healthy volunteers in a discovery cohort of 57 participants. After using stringent criteria and biological pathway analysis, candidate biomarkers from 8 genes were singled out and tested in a validation cohort of 410 participants. Combining the selected biomarkers with a machine learning approach achieved to discriminate depressed patients (n = 267) versus controls (n = 143) with an AUC of 0.930 (CI 95% [0.879–0.982]), a sensitivity of 84.0% and a specificity of 87.1%. In a second step by selecting among the depressed patients those with unipolar depression (n = 160) or BD (n = 95), we identified a combination of 6 biomarkers which allowed a differential diagnosis of bipolar disorder with an AUC of 0.935 and high specificity (Sp = 84.6%) and sensitivity (Se = 90.9%). The association of RNA editing variants modifications with depression subtypes and the use of artificial intelligence allowed developing a new tool to identify, among depressed patients, those suffering from BD. This test will help to reduce the misdiagnosis delay of bipolar patients, leading to an earlier implementation of a proper treatment.
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spelling pubmed-90645412022-05-04 A game changer for bipolar disorder diagnosis using RNA editing-based biomarkers Salvetat, Nicolas Checa-Robles, Francisco Jesus Patel, Vipul Cayzac, Christopher Dubuc, Benjamin Chimienti, Fabrice Abraham, Jean-Daniel Dupré, Pierrick Vetter, Diana Méreuze, Sandie Lang, Jean-Philippe Kupfer, David J. Courtet, Philippe Weissmann, Dinah Transl Psychiatry Article In clinical practice, differentiating Bipolar Disorder (BD) from unipolar depression is a challenge due to the depressive symptoms, which are the core presentations of both disorders. This misdiagnosis during depressive episodes results in a delay in proper treatment and a poor management of their condition. In a first step, using A-to-I RNA editome analysis, we discovered 646 variants (366 genes) differentially edited between depressed patients and healthy volunteers in a discovery cohort of 57 participants. After using stringent criteria and biological pathway analysis, candidate biomarkers from 8 genes were singled out and tested in a validation cohort of 410 participants. Combining the selected biomarkers with a machine learning approach achieved to discriminate depressed patients (n = 267) versus controls (n = 143) with an AUC of 0.930 (CI 95% [0.879–0.982]), a sensitivity of 84.0% and a specificity of 87.1%. In a second step by selecting among the depressed patients those with unipolar depression (n = 160) or BD (n = 95), we identified a combination of 6 biomarkers which allowed a differential diagnosis of bipolar disorder with an AUC of 0.935 and high specificity (Sp = 84.6%) and sensitivity (Se = 90.9%). The association of RNA editing variants modifications with depression subtypes and the use of artificial intelligence allowed developing a new tool to identify, among depressed patients, those suffering from BD. This test will help to reduce the misdiagnosis delay of bipolar patients, leading to an earlier implementation of a proper treatment. Nature Publishing Group UK 2022-05-04 /pmc/articles/PMC9064541/ /pubmed/35504874 http://dx.doi.org/10.1038/s41398-022-01938-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Salvetat, Nicolas
Checa-Robles, Francisco Jesus
Patel, Vipul
Cayzac, Christopher
Dubuc, Benjamin
Chimienti, Fabrice
Abraham, Jean-Daniel
Dupré, Pierrick
Vetter, Diana
Méreuze, Sandie
Lang, Jean-Philippe
Kupfer, David J.
Courtet, Philippe
Weissmann, Dinah
A game changer for bipolar disorder diagnosis using RNA editing-based biomarkers
title A game changer for bipolar disorder diagnosis using RNA editing-based biomarkers
title_full A game changer for bipolar disorder diagnosis using RNA editing-based biomarkers
title_fullStr A game changer for bipolar disorder diagnosis using RNA editing-based biomarkers
title_full_unstemmed A game changer for bipolar disorder diagnosis using RNA editing-based biomarkers
title_short A game changer for bipolar disorder diagnosis using RNA editing-based biomarkers
title_sort game changer for bipolar disorder diagnosis using rna editing-based biomarkers
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9064541/
https://www.ncbi.nlm.nih.gov/pubmed/35504874
http://dx.doi.org/10.1038/s41398-022-01938-6
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