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Quantification of salt stress in wheat leaves by Raman spectroscopy and machine learning

The salinity level of the growing medium has diverse effects on the development of plants, including both physical and biochemical changes. To determine the salt stress level of a plant endures, one can measure these structural and chemical changes. Raman spectroscopy and biochemical analysis are so...

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Autores principales: Kecoglu, Ibrahim, Sirkeci, Merve, Unlu, Mehmet Burcin, Sen, Ayse, Parlatan, Ugur, Guzelcimen, Feyza
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9065003/
https://www.ncbi.nlm.nih.gov/pubmed/35504913
http://dx.doi.org/10.1038/s41598-022-10767-y
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author Kecoglu, Ibrahim
Sirkeci, Merve
Unlu, Mehmet Burcin
Sen, Ayse
Parlatan, Ugur
Guzelcimen, Feyza
author_facet Kecoglu, Ibrahim
Sirkeci, Merve
Unlu, Mehmet Burcin
Sen, Ayse
Parlatan, Ugur
Guzelcimen, Feyza
author_sort Kecoglu, Ibrahim
collection PubMed
description The salinity level of the growing medium has diverse effects on the development of plants, including both physical and biochemical changes. To determine the salt stress level of a plant endures, one can measure these structural and chemical changes. Raman spectroscopy and biochemical analysis are some of the most common techniques in the literature. Here, we present a combination of machine learning and Raman spectroscopy with which we can both find out the biochemical change that occurs while the medium salt concentration changes and predict the level of salt stress a wheat sample experiences accurately using our trained regression models. In addition, by applying different machine learning algorithms, we compare the level of success for different algorithms and determine the best method to use in this application. Production units can take actions based on the quantitative information they get from the trained machine learning models related to salt stress, which can potentially increase efficiency and avoid the loss of crops.
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spelling pubmed-90650032022-05-04 Quantification of salt stress in wheat leaves by Raman spectroscopy and machine learning Kecoglu, Ibrahim Sirkeci, Merve Unlu, Mehmet Burcin Sen, Ayse Parlatan, Ugur Guzelcimen, Feyza Sci Rep Article The salinity level of the growing medium has diverse effects on the development of plants, including both physical and biochemical changes. To determine the salt stress level of a plant endures, one can measure these structural and chemical changes. Raman spectroscopy and biochemical analysis are some of the most common techniques in the literature. Here, we present a combination of machine learning and Raman spectroscopy with which we can both find out the biochemical change that occurs while the medium salt concentration changes and predict the level of salt stress a wheat sample experiences accurately using our trained regression models. In addition, by applying different machine learning algorithms, we compare the level of success for different algorithms and determine the best method to use in this application. Production units can take actions based on the quantitative information they get from the trained machine learning models related to salt stress, which can potentially increase efficiency and avoid the loss of crops. Nature Publishing Group UK 2022-05-03 /pmc/articles/PMC9065003/ /pubmed/35504913 http://dx.doi.org/10.1038/s41598-022-10767-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Kecoglu, Ibrahim
Sirkeci, Merve
Unlu, Mehmet Burcin
Sen, Ayse
Parlatan, Ugur
Guzelcimen, Feyza
Quantification of salt stress in wheat leaves by Raman spectroscopy and machine learning
title Quantification of salt stress in wheat leaves by Raman spectroscopy and machine learning
title_full Quantification of salt stress in wheat leaves by Raman spectroscopy and machine learning
title_fullStr Quantification of salt stress in wheat leaves by Raman spectroscopy and machine learning
title_full_unstemmed Quantification of salt stress in wheat leaves by Raman spectroscopy and machine learning
title_short Quantification of salt stress in wheat leaves by Raman spectroscopy and machine learning
title_sort quantification of salt stress in wheat leaves by raman spectroscopy and machine learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9065003/
https://www.ncbi.nlm.nih.gov/pubmed/35504913
http://dx.doi.org/10.1038/s41598-022-10767-y
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