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DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases

We performed a multi-ethnic Epigenome Wide Association study on 22,774 individuals to describe the DNA methylation signature of chronic low-grade inflammation as measured by C-Reactive protein (CRP). We find 1,511 independent differentially methylated loci associated with CRP. These CpG sites show c...

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Autores principales: Wielscher, Matthias, Mandaviya, Pooja R., Kuehnel, Brigitte, Joehanes, Roby, Mustafa, Rima, Robinson, Oliver, Zhang, Yan, Bodinier, Barbara, Walton, Esther, Mishra, Pashupati P., Schlosser, Pascal, Wilson, Rory, Tsai, Pei-Chien, Palaniswamy, Saranya, Marioni, Riccardo E., Fiorito, Giovanni, Cugliari, Giovanni, Karhunen, Ville, Ghanbari, Mohsen, Psaty, Bruce M., Loh, Marie, Bis, Joshua C., Lehne, Benjamin, Sotoodehnia, Nona, Deary, Ian J., Chadeau-Hyam, Marc, Brody, Jennifer A., Cardona, Alexia, Selvin, Elizabeth, Smith, Alicia K., Miller, Andrew H., Torres, Mylin A., Marouli, Eirini, Gào, Xin, van Meurs, Joyce B. J., Graf-Schindler, Johanna, Rathmann, Wolfgang, Koenig, Wolfgang, Peters, Annette, Weninger, Wolfgang, Farlik, Matthias, Zhang, Tao, Chen, Wei, Xia, Yujing, Teumer, Alexander, Nauck, Matthias, Grabe, Hans J., Doerr, Macus, Lehtimäki, Terho, Guan, Weihua, Milani, Lili, Tanaka, Toshiko, Fisher, Krista, Waite, Lindsay L., Kasela, Silva, Vineis, Paolo, Verweij, Niek, van der Harst, Pim, Iacoviello, Licia, Sacerdote, Carlotta, Panico, Salvatore, Krogh, Vittorio, Tumino, Rosario, Tzala, Evangelia, Matullo, Giuseppe, Hurme, Mikko A., Raitakari, Olli T., Colicino, Elena, Baccarelli, Andrea A., Kähönen, Mika, Herzig, Karl-Heinz, Li, Shengxu, Conneely, Karen N., Kooner, Jaspal S., Köttgen, Anna, Heijmans, Bastiaan T., Deloukas, Panos, Relton, Caroline, Ong, Ken K., Bell, Jordana T., Boerwinkle, Eric, Elliott, Paul, Brenner, Hermann, Beekman, Marian, Levy, Daniel, Waldenberger, Melanie, Chambers, John C., Dehghan, Abbas, Järvelin, Marjo-Riitta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9065016/
https://www.ncbi.nlm.nih.gov/pubmed/35504910
http://dx.doi.org/10.1038/s41467-022-29792-6
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author Wielscher, Matthias
Mandaviya, Pooja R.
Kuehnel, Brigitte
Joehanes, Roby
Mustafa, Rima
Robinson, Oliver
Zhang, Yan
Bodinier, Barbara
Walton, Esther
Mishra, Pashupati P.
Schlosser, Pascal
Wilson, Rory
Tsai, Pei-Chien
Palaniswamy, Saranya
Marioni, Riccardo E.
Fiorito, Giovanni
Cugliari, Giovanni
Karhunen, Ville
Ghanbari, Mohsen
Psaty, Bruce M.
Loh, Marie
Bis, Joshua C.
Lehne, Benjamin
Sotoodehnia, Nona
Deary, Ian J.
Chadeau-Hyam, Marc
Brody, Jennifer A.
Cardona, Alexia
Selvin, Elizabeth
Smith, Alicia K.
Miller, Andrew H.
Torres, Mylin A.
Marouli, Eirini
Gào, Xin
van Meurs, Joyce B. J.
Graf-Schindler, Johanna
Rathmann, Wolfgang
Koenig, Wolfgang
Peters, Annette
Weninger, Wolfgang
Farlik, Matthias
Zhang, Tao
Chen, Wei
Xia, Yujing
Teumer, Alexander
Nauck, Matthias
Grabe, Hans J.
Doerr, Macus
Lehtimäki, Terho
Guan, Weihua
Milani, Lili
Tanaka, Toshiko
Fisher, Krista
Waite, Lindsay L.
Kasela, Silva
Vineis, Paolo
Verweij, Niek
van der Harst, Pim
Iacoviello, Licia
Sacerdote, Carlotta
Panico, Salvatore
Krogh, Vittorio
Tumino, Rosario
Tzala, Evangelia
Matullo, Giuseppe
Hurme, Mikko A.
Raitakari, Olli T.
Colicino, Elena
Baccarelli, Andrea A.
Kähönen, Mika
Herzig, Karl-Heinz
Li, Shengxu
Conneely, Karen N.
Kooner, Jaspal S.
Köttgen, Anna
Heijmans, Bastiaan T.
Deloukas, Panos
Relton, Caroline
Ong, Ken K.
Bell, Jordana T.
Boerwinkle, Eric
Elliott, Paul
Brenner, Hermann
Beekman, Marian
Levy, Daniel
Waldenberger, Melanie
Chambers, John C.
Dehghan, Abbas
Järvelin, Marjo-Riitta
author_facet Wielscher, Matthias
Mandaviya, Pooja R.
Kuehnel, Brigitte
Joehanes, Roby
Mustafa, Rima
Robinson, Oliver
Zhang, Yan
Bodinier, Barbara
Walton, Esther
Mishra, Pashupati P.
Schlosser, Pascal
Wilson, Rory
Tsai, Pei-Chien
Palaniswamy, Saranya
Marioni, Riccardo E.
Fiorito, Giovanni
Cugliari, Giovanni
Karhunen, Ville
Ghanbari, Mohsen
Psaty, Bruce M.
Loh, Marie
Bis, Joshua C.
Lehne, Benjamin
Sotoodehnia, Nona
Deary, Ian J.
Chadeau-Hyam, Marc
Brody, Jennifer A.
Cardona, Alexia
Selvin, Elizabeth
Smith, Alicia K.
Miller, Andrew H.
Torres, Mylin A.
Marouli, Eirini
Gào, Xin
van Meurs, Joyce B. J.
Graf-Schindler, Johanna
Rathmann, Wolfgang
Koenig, Wolfgang
Peters, Annette
Weninger, Wolfgang
Farlik, Matthias
Zhang, Tao
Chen, Wei
Xia, Yujing
Teumer, Alexander
Nauck, Matthias
Grabe, Hans J.
Doerr, Macus
Lehtimäki, Terho
Guan, Weihua
Milani, Lili
Tanaka, Toshiko
Fisher, Krista
Waite, Lindsay L.
Kasela, Silva
Vineis, Paolo
Verweij, Niek
van der Harst, Pim
Iacoviello, Licia
Sacerdote, Carlotta
Panico, Salvatore
Krogh, Vittorio
Tumino, Rosario
Tzala, Evangelia
Matullo, Giuseppe
Hurme, Mikko A.
Raitakari, Olli T.
Colicino, Elena
Baccarelli, Andrea A.
Kähönen, Mika
Herzig, Karl-Heinz
Li, Shengxu
Conneely, Karen N.
Kooner, Jaspal S.
Köttgen, Anna
Heijmans, Bastiaan T.
Deloukas, Panos
Relton, Caroline
Ong, Ken K.
Bell, Jordana T.
Boerwinkle, Eric
Elliott, Paul
Brenner, Hermann
Beekman, Marian
Levy, Daniel
Waldenberger, Melanie
Chambers, John C.
Dehghan, Abbas
Järvelin, Marjo-Riitta
author_sort Wielscher, Matthias
collection PubMed
description We performed a multi-ethnic Epigenome Wide Association study on 22,774 individuals to describe the DNA methylation signature of chronic low-grade inflammation as measured by C-Reactive protein (CRP). We find 1,511 independent differentially methylated loci associated with CRP. These CpG sites show correlation structures across chromosomes, and are primarily situated in euchromatin, depleted in CpG islands. These genomic loci are predominantly situated in transcription factor binding sites and genomic enhancer regions. Mendelian randomization analysis suggests altered CpG methylation is a consequence of increased blood CRP levels. Mediation analysis reveals obesity and smoking as important underlying driving factors for changed CpG methylation. Finally, we find that an activated CpG signature significantly increases the risk for cardiometabolic diseases and COPD.
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spelling pubmed-90650162022-05-04 DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases Wielscher, Matthias Mandaviya, Pooja R. Kuehnel, Brigitte Joehanes, Roby Mustafa, Rima Robinson, Oliver Zhang, Yan Bodinier, Barbara Walton, Esther Mishra, Pashupati P. Schlosser, Pascal Wilson, Rory Tsai, Pei-Chien Palaniswamy, Saranya Marioni, Riccardo E. Fiorito, Giovanni Cugliari, Giovanni Karhunen, Ville Ghanbari, Mohsen Psaty, Bruce M. Loh, Marie Bis, Joshua C. Lehne, Benjamin Sotoodehnia, Nona Deary, Ian J. Chadeau-Hyam, Marc Brody, Jennifer A. Cardona, Alexia Selvin, Elizabeth Smith, Alicia K. Miller, Andrew H. Torres, Mylin A. Marouli, Eirini Gào, Xin van Meurs, Joyce B. J. Graf-Schindler, Johanna Rathmann, Wolfgang Koenig, Wolfgang Peters, Annette Weninger, Wolfgang Farlik, Matthias Zhang, Tao Chen, Wei Xia, Yujing Teumer, Alexander Nauck, Matthias Grabe, Hans J. Doerr, Macus Lehtimäki, Terho Guan, Weihua Milani, Lili Tanaka, Toshiko Fisher, Krista Waite, Lindsay L. Kasela, Silva Vineis, Paolo Verweij, Niek van der Harst, Pim Iacoviello, Licia Sacerdote, Carlotta Panico, Salvatore Krogh, Vittorio Tumino, Rosario Tzala, Evangelia Matullo, Giuseppe Hurme, Mikko A. Raitakari, Olli T. Colicino, Elena Baccarelli, Andrea A. Kähönen, Mika Herzig, Karl-Heinz Li, Shengxu Conneely, Karen N. Kooner, Jaspal S. Köttgen, Anna Heijmans, Bastiaan T. Deloukas, Panos Relton, Caroline Ong, Ken K. Bell, Jordana T. Boerwinkle, Eric Elliott, Paul Brenner, Hermann Beekman, Marian Levy, Daniel Waldenberger, Melanie Chambers, John C. Dehghan, Abbas Järvelin, Marjo-Riitta Nat Commun Article We performed a multi-ethnic Epigenome Wide Association study on 22,774 individuals to describe the DNA methylation signature of chronic low-grade inflammation as measured by C-Reactive protein (CRP). We find 1,511 independent differentially methylated loci associated with CRP. These CpG sites show correlation structures across chromosomes, and are primarily situated in euchromatin, depleted in CpG islands. These genomic loci are predominantly situated in transcription factor binding sites and genomic enhancer regions. Mendelian randomization analysis suggests altered CpG methylation is a consequence of increased blood CRP levels. Mediation analysis reveals obesity and smoking as important underlying driving factors for changed CpG methylation. Finally, we find that an activated CpG signature significantly increases the risk for cardiometabolic diseases and COPD. Nature Publishing Group UK 2022-05-03 /pmc/articles/PMC9065016/ /pubmed/35504910 http://dx.doi.org/10.1038/s41467-022-29792-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Wielscher, Matthias
Mandaviya, Pooja R.
Kuehnel, Brigitte
Joehanes, Roby
Mustafa, Rima
Robinson, Oliver
Zhang, Yan
Bodinier, Barbara
Walton, Esther
Mishra, Pashupati P.
Schlosser, Pascal
Wilson, Rory
Tsai, Pei-Chien
Palaniswamy, Saranya
Marioni, Riccardo E.
Fiorito, Giovanni
Cugliari, Giovanni
Karhunen, Ville
Ghanbari, Mohsen
Psaty, Bruce M.
Loh, Marie
Bis, Joshua C.
Lehne, Benjamin
Sotoodehnia, Nona
Deary, Ian J.
Chadeau-Hyam, Marc
Brody, Jennifer A.
Cardona, Alexia
Selvin, Elizabeth
Smith, Alicia K.
Miller, Andrew H.
Torres, Mylin A.
Marouli, Eirini
Gào, Xin
van Meurs, Joyce B. J.
Graf-Schindler, Johanna
Rathmann, Wolfgang
Koenig, Wolfgang
Peters, Annette
Weninger, Wolfgang
Farlik, Matthias
Zhang, Tao
Chen, Wei
Xia, Yujing
Teumer, Alexander
Nauck, Matthias
Grabe, Hans J.
Doerr, Macus
Lehtimäki, Terho
Guan, Weihua
Milani, Lili
Tanaka, Toshiko
Fisher, Krista
Waite, Lindsay L.
Kasela, Silva
Vineis, Paolo
Verweij, Niek
van der Harst, Pim
Iacoviello, Licia
Sacerdote, Carlotta
Panico, Salvatore
Krogh, Vittorio
Tumino, Rosario
Tzala, Evangelia
Matullo, Giuseppe
Hurme, Mikko A.
Raitakari, Olli T.
Colicino, Elena
Baccarelli, Andrea A.
Kähönen, Mika
Herzig, Karl-Heinz
Li, Shengxu
Conneely, Karen N.
Kooner, Jaspal S.
Köttgen, Anna
Heijmans, Bastiaan T.
Deloukas, Panos
Relton, Caroline
Ong, Ken K.
Bell, Jordana T.
Boerwinkle, Eric
Elliott, Paul
Brenner, Hermann
Beekman, Marian
Levy, Daniel
Waldenberger, Melanie
Chambers, John C.
Dehghan, Abbas
Järvelin, Marjo-Riitta
DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases
title DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases
title_full DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases
title_fullStr DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases
title_full_unstemmed DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases
title_short DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases
title_sort dna methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9065016/
https://www.ncbi.nlm.nih.gov/pubmed/35504910
http://dx.doi.org/10.1038/s41467-022-29792-6
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