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DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases
We performed a multi-ethnic Epigenome Wide Association study on 22,774 individuals to describe the DNA methylation signature of chronic low-grade inflammation as measured by C-Reactive protein (CRP). We find 1,511 independent differentially methylated loci associated with CRP. These CpG sites show c...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9065016/ https://www.ncbi.nlm.nih.gov/pubmed/35504910 http://dx.doi.org/10.1038/s41467-022-29792-6 |
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author | Wielscher, Matthias Mandaviya, Pooja R. Kuehnel, Brigitte Joehanes, Roby Mustafa, Rima Robinson, Oliver Zhang, Yan Bodinier, Barbara Walton, Esther Mishra, Pashupati P. Schlosser, Pascal Wilson, Rory Tsai, Pei-Chien Palaniswamy, Saranya Marioni, Riccardo E. Fiorito, Giovanni Cugliari, Giovanni Karhunen, Ville Ghanbari, Mohsen Psaty, Bruce M. Loh, Marie Bis, Joshua C. Lehne, Benjamin Sotoodehnia, Nona Deary, Ian J. Chadeau-Hyam, Marc Brody, Jennifer A. Cardona, Alexia Selvin, Elizabeth Smith, Alicia K. Miller, Andrew H. Torres, Mylin A. Marouli, Eirini Gào, Xin van Meurs, Joyce B. J. Graf-Schindler, Johanna Rathmann, Wolfgang Koenig, Wolfgang Peters, Annette Weninger, Wolfgang Farlik, Matthias Zhang, Tao Chen, Wei Xia, Yujing Teumer, Alexander Nauck, Matthias Grabe, Hans J. Doerr, Macus Lehtimäki, Terho Guan, Weihua Milani, Lili Tanaka, Toshiko Fisher, Krista Waite, Lindsay L. Kasela, Silva Vineis, Paolo Verweij, Niek van der Harst, Pim Iacoviello, Licia Sacerdote, Carlotta Panico, Salvatore Krogh, Vittorio Tumino, Rosario Tzala, Evangelia Matullo, Giuseppe Hurme, Mikko A. Raitakari, Olli T. Colicino, Elena Baccarelli, Andrea A. Kähönen, Mika Herzig, Karl-Heinz Li, Shengxu Conneely, Karen N. Kooner, Jaspal S. Köttgen, Anna Heijmans, Bastiaan T. Deloukas, Panos Relton, Caroline Ong, Ken K. Bell, Jordana T. Boerwinkle, Eric Elliott, Paul Brenner, Hermann Beekman, Marian Levy, Daniel Waldenberger, Melanie Chambers, John C. Dehghan, Abbas Järvelin, Marjo-Riitta |
author_facet | Wielscher, Matthias Mandaviya, Pooja R. Kuehnel, Brigitte Joehanes, Roby Mustafa, Rima Robinson, Oliver Zhang, Yan Bodinier, Barbara Walton, Esther Mishra, Pashupati P. Schlosser, Pascal Wilson, Rory Tsai, Pei-Chien Palaniswamy, Saranya Marioni, Riccardo E. Fiorito, Giovanni Cugliari, Giovanni Karhunen, Ville Ghanbari, Mohsen Psaty, Bruce M. Loh, Marie Bis, Joshua C. Lehne, Benjamin Sotoodehnia, Nona Deary, Ian J. Chadeau-Hyam, Marc Brody, Jennifer A. Cardona, Alexia Selvin, Elizabeth Smith, Alicia K. Miller, Andrew H. Torres, Mylin A. Marouli, Eirini Gào, Xin van Meurs, Joyce B. J. Graf-Schindler, Johanna Rathmann, Wolfgang Koenig, Wolfgang Peters, Annette Weninger, Wolfgang Farlik, Matthias Zhang, Tao Chen, Wei Xia, Yujing Teumer, Alexander Nauck, Matthias Grabe, Hans J. Doerr, Macus Lehtimäki, Terho Guan, Weihua Milani, Lili Tanaka, Toshiko Fisher, Krista Waite, Lindsay L. Kasela, Silva Vineis, Paolo Verweij, Niek van der Harst, Pim Iacoviello, Licia Sacerdote, Carlotta Panico, Salvatore Krogh, Vittorio Tumino, Rosario Tzala, Evangelia Matullo, Giuseppe Hurme, Mikko A. Raitakari, Olli T. Colicino, Elena Baccarelli, Andrea A. Kähönen, Mika Herzig, Karl-Heinz Li, Shengxu Conneely, Karen N. Kooner, Jaspal S. Köttgen, Anna Heijmans, Bastiaan T. Deloukas, Panos Relton, Caroline Ong, Ken K. Bell, Jordana T. Boerwinkle, Eric Elliott, Paul Brenner, Hermann Beekman, Marian Levy, Daniel Waldenberger, Melanie Chambers, John C. Dehghan, Abbas Järvelin, Marjo-Riitta |
author_sort | Wielscher, Matthias |
collection | PubMed |
description | We performed a multi-ethnic Epigenome Wide Association study on 22,774 individuals to describe the DNA methylation signature of chronic low-grade inflammation as measured by C-Reactive protein (CRP). We find 1,511 independent differentially methylated loci associated with CRP. These CpG sites show correlation structures across chromosomes, and are primarily situated in euchromatin, depleted in CpG islands. These genomic loci are predominantly situated in transcription factor binding sites and genomic enhancer regions. Mendelian randomization analysis suggests altered CpG methylation is a consequence of increased blood CRP levels. Mediation analysis reveals obesity and smoking as important underlying driving factors for changed CpG methylation. Finally, we find that an activated CpG signature significantly increases the risk for cardiometabolic diseases and COPD. |
format | Online Article Text |
id | pubmed-9065016 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-90650162022-05-04 DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases Wielscher, Matthias Mandaviya, Pooja R. Kuehnel, Brigitte Joehanes, Roby Mustafa, Rima Robinson, Oliver Zhang, Yan Bodinier, Barbara Walton, Esther Mishra, Pashupati P. Schlosser, Pascal Wilson, Rory Tsai, Pei-Chien Palaniswamy, Saranya Marioni, Riccardo E. Fiorito, Giovanni Cugliari, Giovanni Karhunen, Ville Ghanbari, Mohsen Psaty, Bruce M. Loh, Marie Bis, Joshua C. Lehne, Benjamin Sotoodehnia, Nona Deary, Ian J. Chadeau-Hyam, Marc Brody, Jennifer A. Cardona, Alexia Selvin, Elizabeth Smith, Alicia K. Miller, Andrew H. Torres, Mylin A. Marouli, Eirini Gào, Xin van Meurs, Joyce B. J. Graf-Schindler, Johanna Rathmann, Wolfgang Koenig, Wolfgang Peters, Annette Weninger, Wolfgang Farlik, Matthias Zhang, Tao Chen, Wei Xia, Yujing Teumer, Alexander Nauck, Matthias Grabe, Hans J. Doerr, Macus Lehtimäki, Terho Guan, Weihua Milani, Lili Tanaka, Toshiko Fisher, Krista Waite, Lindsay L. Kasela, Silva Vineis, Paolo Verweij, Niek van der Harst, Pim Iacoviello, Licia Sacerdote, Carlotta Panico, Salvatore Krogh, Vittorio Tumino, Rosario Tzala, Evangelia Matullo, Giuseppe Hurme, Mikko A. Raitakari, Olli T. Colicino, Elena Baccarelli, Andrea A. Kähönen, Mika Herzig, Karl-Heinz Li, Shengxu Conneely, Karen N. Kooner, Jaspal S. Köttgen, Anna Heijmans, Bastiaan T. Deloukas, Panos Relton, Caroline Ong, Ken K. Bell, Jordana T. Boerwinkle, Eric Elliott, Paul Brenner, Hermann Beekman, Marian Levy, Daniel Waldenberger, Melanie Chambers, John C. Dehghan, Abbas Järvelin, Marjo-Riitta Nat Commun Article We performed a multi-ethnic Epigenome Wide Association study on 22,774 individuals to describe the DNA methylation signature of chronic low-grade inflammation as measured by C-Reactive protein (CRP). We find 1,511 independent differentially methylated loci associated with CRP. These CpG sites show correlation structures across chromosomes, and are primarily situated in euchromatin, depleted in CpG islands. These genomic loci are predominantly situated in transcription factor binding sites and genomic enhancer regions. Mendelian randomization analysis suggests altered CpG methylation is a consequence of increased blood CRP levels. Mediation analysis reveals obesity and smoking as important underlying driving factors for changed CpG methylation. Finally, we find that an activated CpG signature significantly increases the risk for cardiometabolic diseases and COPD. Nature Publishing Group UK 2022-05-03 /pmc/articles/PMC9065016/ /pubmed/35504910 http://dx.doi.org/10.1038/s41467-022-29792-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Wielscher, Matthias Mandaviya, Pooja R. Kuehnel, Brigitte Joehanes, Roby Mustafa, Rima Robinson, Oliver Zhang, Yan Bodinier, Barbara Walton, Esther Mishra, Pashupati P. Schlosser, Pascal Wilson, Rory Tsai, Pei-Chien Palaniswamy, Saranya Marioni, Riccardo E. Fiorito, Giovanni Cugliari, Giovanni Karhunen, Ville Ghanbari, Mohsen Psaty, Bruce M. Loh, Marie Bis, Joshua C. Lehne, Benjamin Sotoodehnia, Nona Deary, Ian J. Chadeau-Hyam, Marc Brody, Jennifer A. Cardona, Alexia Selvin, Elizabeth Smith, Alicia K. Miller, Andrew H. Torres, Mylin A. Marouli, Eirini Gào, Xin van Meurs, Joyce B. J. Graf-Schindler, Johanna Rathmann, Wolfgang Koenig, Wolfgang Peters, Annette Weninger, Wolfgang Farlik, Matthias Zhang, Tao Chen, Wei Xia, Yujing Teumer, Alexander Nauck, Matthias Grabe, Hans J. Doerr, Macus Lehtimäki, Terho Guan, Weihua Milani, Lili Tanaka, Toshiko Fisher, Krista Waite, Lindsay L. Kasela, Silva Vineis, Paolo Verweij, Niek van der Harst, Pim Iacoviello, Licia Sacerdote, Carlotta Panico, Salvatore Krogh, Vittorio Tumino, Rosario Tzala, Evangelia Matullo, Giuseppe Hurme, Mikko A. Raitakari, Olli T. Colicino, Elena Baccarelli, Andrea A. Kähönen, Mika Herzig, Karl-Heinz Li, Shengxu Conneely, Karen N. Kooner, Jaspal S. Köttgen, Anna Heijmans, Bastiaan T. Deloukas, Panos Relton, Caroline Ong, Ken K. Bell, Jordana T. Boerwinkle, Eric Elliott, Paul Brenner, Hermann Beekman, Marian Levy, Daniel Waldenberger, Melanie Chambers, John C. Dehghan, Abbas Järvelin, Marjo-Riitta DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases |
title | DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases |
title_full | DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases |
title_fullStr | DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases |
title_full_unstemmed | DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases |
title_short | DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases |
title_sort | dna methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9065016/ https://www.ncbi.nlm.nih.gov/pubmed/35504910 http://dx.doi.org/10.1038/s41467-022-29792-6 |
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