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Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing

BACKGROUND: Colorectal cancer (CRC) is one of the most prevalent malignances worldwide. However, CRC with situs inversus totalis (SCRC) is extremely rare, and molecular characterization of this disease has never been investigated. METHODS: Tumor tissue samples from 8 patients with SCRC and 33 CRC pa...

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Autores principales: Li, Hongsen, Gong, Liu, Cheng, Huanqing, Wang, Huina, Zhang, Xiaochen, Rao, Chuangzhou, Song, Zhangfa, Wang, Da, Lou, Haizhou, Lou, Feng, Cao, Shanbo, Pan, Hongming, Fang, Yong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9067615/
https://www.ncbi.nlm.nih.gov/pubmed/35530355
http://dx.doi.org/10.3389/fonc.2022.813253
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author Li, Hongsen
Gong, Liu
Cheng, Huanqing
Wang, Huina
Zhang, Xiaochen
Rao, Chuangzhou
Song, Zhangfa
Wang, Da
Lou, Haizhou
Lou, Feng
Cao, Shanbo
Pan, Hongming
Fang, Yong
author_facet Li, Hongsen
Gong, Liu
Cheng, Huanqing
Wang, Huina
Zhang, Xiaochen
Rao, Chuangzhou
Song, Zhangfa
Wang, Da
Lou, Haizhou
Lou, Feng
Cao, Shanbo
Pan, Hongming
Fang, Yong
author_sort Li, Hongsen
collection PubMed
description BACKGROUND: Colorectal cancer (CRC) is one of the most prevalent malignances worldwide. However, CRC with situs inversus totalis (SCRC) is extremely rare, and molecular characterization of this disease has never been investigated. METHODS: Tumor tissue samples from 8 patients with SCRC and 33 CRC patients without situs inversus totalis (NSCRC) were subjected to multigene next-generation sequencing. RESULTS: The most frequently mutated genes in SCRC were APC, TP53, CHEK2, MDC1, GNAQ, KRAS, and SMAD4. A high frequency of SCRC tumors had mutations in DNA damage repair genes. Single amino acid substitutions in the DNA damage repair genes caused by continuous double base substitution was identified in the majority of this population. Furthermore, mutational profiles showed notable differences between the SCRC and NSCRC groups. In particular, CHEK2, MDC1, GNAQ, SMAD4, BRCA1, HLA-B, LATS2, and NLRC5 mutations were more frequently observed in SCRC patients. The mutation loci distributions of KRAS in the SCRC cohort differed from that of the NSCRC cohort. Additionally, differences in the targeted genomic profiles and base substitution patterns were observed between the two groups. CONCLUSIONS: These findings comprehensively revealed a molecular characterization of SCRC, which will contribute to the development of personalized therapy and improved clinical management of SCRC patients.
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spelling pubmed-90676152022-05-05 Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing Li, Hongsen Gong, Liu Cheng, Huanqing Wang, Huina Zhang, Xiaochen Rao, Chuangzhou Song, Zhangfa Wang, Da Lou, Haizhou Lou, Feng Cao, Shanbo Pan, Hongming Fang, Yong Front Oncol Oncology BACKGROUND: Colorectal cancer (CRC) is one of the most prevalent malignances worldwide. However, CRC with situs inversus totalis (SCRC) is extremely rare, and molecular characterization of this disease has never been investigated. METHODS: Tumor tissue samples from 8 patients with SCRC and 33 CRC patients without situs inversus totalis (NSCRC) were subjected to multigene next-generation sequencing. RESULTS: The most frequently mutated genes in SCRC were APC, TP53, CHEK2, MDC1, GNAQ, KRAS, and SMAD4. A high frequency of SCRC tumors had mutations in DNA damage repair genes. Single amino acid substitutions in the DNA damage repair genes caused by continuous double base substitution was identified in the majority of this population. Furthermore, mutational profiles showed notable differences between the SCRC and NSCRC groups. In particular, CHEK2, MDC1, GNAQ, SMAD4, BRCA1, HLA-B, LATS2, and NLRC5 mutations were more frequently observed in SCRC patients. The mutation loci distributions of KRAS in the SCRC cohort differed from that of the NSCRC cohort. Additionally, differences in the targeted genomic profiles and base substitution patterns were observed between the two groups. CONCLUSIONS: These findings comprehensively revealed a molecular characterization of SCRC, which will contribute to the development of personalized therapy and improved clinical management of SCRC patients. Frontiers Media S.A. 2022-04-20 /pmc/articles/PMC9067615/ /pubmed/35530355 http://dx.doi.org/10.3389/fonc.2022.813253 Text en Copyright © 2022 Li, Gong, Cheng, Wang, Zhang, Rao, Song, Wang, Lou, Lou, Cao, Pan and Fang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Li, Hongsen
Gong, Liu
Cheng, Huanqing
Wang, Huina
Zhang, Xiaochen
Rao, Chuangzhou
Song, Zhangfa
Wang, Da
Lou, Haizhou
Lou, Feng
Cao, Shanbo
Pan, Hongming
Fang, Yong
Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing
title Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing
title_full Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing
title_fullStr Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing
title_full_unstemmed Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing
title_short Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing
title_sort comprehensive molecular profiling of colorectal cancer with situs inversus totalis by next-generation sequencing
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9067615/
https://www.ncbi.nlm.nih.gov/pubmed/35530355
http://dx.doi.org/10.3389/fonc.2022.813253
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