Cargando…
Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing
BACKGROUND: Colorectal cancer (CRC) is one of the most prevalent malignances worldwide. However, CRC with situs inversus totalis (SCRC) is extremely rare, and molecular characterization of this disease has never been investigated. METHODS: Tumor tissue samples from 8 patients with SCRC and 33 CRC pa...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9067615/ https://www.ncbi.nlm.nih.gov/pubmed/35530355 http://dx.doi.org/10.3389/fonc.2022.813253 |
_version_ | 1784700042737614848 |
---|---|
author | Li, Hongsen Gong, Liu Cheng, Huanqing Wang, Huina Zhang, Xiaochen Rao, Chuangzhou Song, Zhangfa Wang, Da Lou, Haizhou Lou, Feng Cao, Shanbo Pan, Hongming Fang, Yong |
author_facet | Li, Hongsen Gong, Liu Cheng, Huanqing Wang, Huina Zhang, Xiaochen Rao, Chuangzhou Song, Zhangfa Wang, Da Lou, Haizhou Lou, Feng Cao, Shanbo Pan, Hongming Fang, Yong |
author_sort | Li, Hongsen |
collection | PubMed |
description | BACKGROUND: Colorectal cancer (CRC) is one of the most prevalent malignances worldwide. However, CRC with situs inversus totalis (SCRC) is extremely rare, and molecular characterization of this disease has never been investigated. METHODS: Tumor tissue samples from 8 patients with SCRC and 33 CRC patients without situs inversus totalis (NSCRC) were subjected to multigene next-generation sequencing. RESULTS: The most frequently mutated genes in SCRC were APC, TP53, CHEK2, MDC1, GNAQ, KRAS, and SMAD4. A high frequency of SCRC tumors had mutations in DNA damage repair genes. Single amino acid substitutions in the DNA damage repair genes caused by continuous double base substitution was identified in the majority of this population. Furthermore, mutational profiles showed notable differences between the SCRC and NSCRC groups. In particular, CHEK2, MDC1, GNAQ, SMAD4, BRCA1, HLA-B, LATS2, and NLRC5 mutations were more frequently observed in SCRC patients. The mutation loci distributions of KRAS in the SCRC cohort differed from that of the NSCRC cohort. Additionally, differences in the targeted genomic profiles and base substitution patterns were observed between the two groups. CONCLUSIONS: These findings comprehensively revealed a molecular characterization of SCRC, which will contribute to the development of personalized therapy and improved clinical management of SCRC patients. |
format | Online Article Text |
id | pubmed-9067615 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-90676152022-05-05 Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing Li, Hongsen Gong, Liu Cheng, Huanqing Wang, Huina Zhang, Xiaochen Rao, Chuangzhou Song, Zhangfa Wang, Da Lou, Haizhou Lou, Feng Cao, Shanbo Pan, Hongming Fang, Yong Front Oncol Oncology BACKGROUND: Colorectal cancer (CRC) is one of the most prevalent malignances worldwide. However, CRC with situs inversus totalis (SCRC) is extremely rare, and molecular characterization of this disease has never been investigated. METHODS: Tumor tissue samples from 8 patients with SCRC and 33 CRC patients without situs inversus totalis (NSCRC) were subjected to multigene next-generation sequencing. RESULTS: The most frequently mutated genes in SCRC were APC, TP53, CHEK2, MDC1, GNAQ, KRAS, and SMAD4. A high frequency of SCRC tumors had mutations in DNA damage repair genes. Single amino acid substitutions in the DNA damage repair genes caused by continuous double base substitution was identified in the majority of this population. Furthermore, mutational profiles showed notable differences between the SCRC and NSCRC groups. In particular, CHEK2, MDC1, GNAQ, SMAD4, BRCA1, HLA-B, LATS2, and NLRC5 mutations were more frequently observed in SCRC patients. The mutation loci distributions of KRAS in the SCRC cohort differed from that of the NSCRC cohort. Additionally, differences in the targeted genomic profiles and base substitution patterns were observed between the two groups. CONCLUSIONS: These findings comprehensively revealed a molecular characterization of SCRC, which will contribute to the development of personalized therapy and improved clinical management of SCRC patients. Frontiers Media S.A. 2022-04-20 /pmc/articles/PMC9067615/ /pubmed/35530355 http://dx.doi.org/10.3389/fonc.2022.813253 Text en Copyright © 2022 Li, Gong, Cheng, Wang, Zhang, Rao, Song, Wang, Lou, Lou, Cao, Pan and Fang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Li, Hongsen Gong, Liu Cheng, Huanqing Wang, Huina Zhang, Xiaochen Rao, Chuangzhou Song, Zhangfa Wang, Da Lou, Haizhou Lou, Feng Cao, Shanbo Pan, Hongming Fang, Yong Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing |
title | Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing |
title_full | Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing |
title_fullStr | Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing |
title_full_unstemmed | Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing |
title_short | Comprehensive Molecular Profiling of Colorectal Cancer With Situs Inversus Totalis by Next-Generation Sequencing |
title_sort | comprehensive molecular profiling of colorectal cancer with situs inversus totalis by next-generation sequencing |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9067615/ https://www.ncbi.nlm.nih.gov/pubmed/35530355 http://dx.doi.org/10.3389/fonc.2022.813253 |
work_keys_str_mv | AT lihongsen comprehensivemolecularprofilingofcolorectalcancerwithsitusinversustotalisbynextgenerationsequencing AT gongliu comprehensivemolecularprofilingofcolorectalcancerwithsitusinversustotalisbynextgenerationsequencing AT chenghuanqing comprehensivemolecularprofilingofcolorectalcancerwithsitusinversustotalisbynextgenerationsequencing AT wanghuina comprehensivemolecularprofilingofcolorectalcancerwithsitusinversustotalisbynextgenerationsequencing AT zhangxiaochen comprehensivemolecularprofilingofcolorectalcancerwithsitusinversustotalisbynextgenerationsequencing AT raochuangzhou comprehensivemolecularprofilingofcolorectalcancerwithsitusinversustotalisbynextgenerationsequencing AT songzhangfa comprehensivemolecularprofilingofcolorectalcancerwithsitusinversustotalisbynextgenerationsequencing AT wangda comprehensivemolecularprofilingofcolorectalcancerwithsitusinversustotalisbynextgenerationsequencing AT louhaizhou comprehensivemolecularprofilingofcolorectalcancerwithsitusinversustotalisbynextgenerationsequencing AT loufeng comprehensivemolecularprofilingofcolorectalcancerwithsitusinversustotalisbynextgenerationsequencing AT caoshanbo comprehensivemolecularprofilingofcolorectalcancerwithsitusinversustotalisbynextgenerationsequencing AT panhongming comprehensivemolecularprofilingofcolorectalcancerwithsitusinversustotalisbynextgenerationsequencing AT fangyong comprehensivemolecularprofilingofcolorectalcancerwithsitusinversustotalisbynextgenerationsequencing |