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Updating age-specific contact structures to match evolving demography in a dynamic mathematical model of tuberculosis vaccination
We investigated the effects of updating age-specific social contact matrices to match evolving demography on vaccine impact estimates. We used a dynamic transmission model of tuberculosis in India as a case study. We modelled four incremental methods to update contact matrices over time, where each...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9067655/ https://www.ncbi.nlm.nih.gov/pubmed/35452459 http://dx.doi.org/10.1371/journal.pcbi.1010002 |
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author | Weerasuriya, Chathika Krishan Harris, Rebecca Claire McQuaid, Christopher Finn Gomez, Gabriela B. White, Richard G. |
author_facet | Weerasuriya, Chathika Krishan Harris, Rebecca Claire McQuaid, Christopher Finn Gomez, Gabriela B. White, Richard G. |
author_sort | Weerasuriya, Chathika Krishan |
collection | PubMed |
description | We investigated the effects of updating age-specific social contact matrices to match evolving demography on vaccine impact estimates. We used a dynamic transmission model of tuberculosis in India as a case study. We modelled four incremental methods to update contact matrices over time, where each method incorporated its predecessor: fixed contact matrix (M0), preserved contact reciprocity (M1), preserved contact assortativity (M2), and preserved average contacts per individual (M3). We updated the contact matrices of a deterministic compartmental model of tuberculosis transmission, calibrated to epidemiologic data between 2000 and 2019 derived from India. We additionally calibrated the M0, M2, and M3 models to the 2050 TB incidence rate projected by the calibrated M1 model. We stratified age into three groups, children (<15y), adults (≥15y, <65y), and the elderly (≥65y), using World Population Prospects demographic data, between which we applied POLYMOD-derived social contact matrices. We simulated an M72-AS01(E)-like tuberculosis vaccine delivered from 2027 and estimated the per cent TB incidence rate reduction (IRR) in 2050 under each update method. We found that vaccine impact estimates in all age groups remained relatively stable between the M0–M3 models, irrespective of vaccine-targeting by age group. The maximum difference in impact, observed following adult-targeted vaccination, was 7% in the elderly, in whom we observed IRRs of 19% (uncertainty range 13–32), 20% (UR 13–31), 22% (UR 14–37), and 26% (UR 18–38) following M0, M1, M2 and M3 updates, respectively. We found that model-based TB vaccine impact estimates were relatively insensitive to demography-matched contact matrix updates in an India-like demographic and epidemiologic scenario. Current model-based TB vaccine impact estimates may be reasonably robust to the lack of contact matrix updates, but further research is needed to confirm and generalise this finding. |
format | Online Article Text |
id | pubmed-9067655 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-90676552022-05-05 Updating age-specific contact structures to match evolving demography in a dynamic mathematical model of tuberculosis vaccination Weerasuriya, Chathika Krishan Harris, Rebecca Claire McQuaid, Christopher Finn Gomez, Gabriela B. White, Richard G. PLoS Comput Biol Research Article We investigated the effects of updating age-specific social contact matrices to match evolving demography on vaccine impact estimates. We used a dynamic transmission model of tuberculosis in India as a case study. We modelled four incremental methods to update contact matrices over time, where each method incorporated its predecessor: fixed contact matrix (M0), preserved contact reciprocity (M1), preserved contact assortativity (M2), and preserved average contacts per individual (M3). We updated the contact matrices of a deterministic compartmental model of tuberculosis transmission, calibrated to epidemiologic data between 2000 and 2019 derived from India. We additionally calibrated the M0, M2, and M3 models to the 2050 TB incidence rate projected by the calibrated M1 model. We stratified age into three groups, children (<15y), adults (≥15y, <65y), and the elderly (≥65y), using World Population Prospects demographic data, between which we applied POLYMOD-derived social contact matrices. We simulated an M72-AS01(E)-like tuberculosis vaccine delivered from 2027 and estimated the per cent TB incidence rate reduction (IRR) in 2050 under each update method. We found that vaccine impact estimates in all age groups remained relatively stable between the M0–M3 models, irrespective of vaccine-targeting by age group. The maximum difference in impact, observed following adult-targeted vaccination, was 7% in the elderly, in whom we observed IRRs of 19% (uncertainty range 13–32), 20% (UR 13–31), 22% (UR 14–37), and 26% (UR 18–38) following M0, M1, M2 and M3 updates, respectively. We found that model-based TB vaccine impact estimates were relatively insensitive to demography-matched contact matrix updates in an India-like demographic and epidemiologic scenario. Current model-based TB vaccine impact estimates may be reasonably robust to the lack of contact matrix updates, but further research is needed to confirm and generalise this finding. Public Library of Science 2022-04-22 /pmc/articles/PMC9067655/ /pubmed/35452459 http://dx.doi.org/10.1371/journal.pcbi.1010002 Text en © 2022 Weerasuriya et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Weerasuriya, Chathika Krishan Harris, Rebecca Claire McQuaid, Christopher Finn Gomez, Gabriela B. White, Richard G. Updating age-specific contact structures to match evolving demography in a dynamic mathematical model of tuberculosis vaccination |
title | Updating age-specific contact structures to match evolving demography in a dynamic mathematical model of tuberculosis vaccination |
title_full | Updating age-specific contact structures to match evolving demography in a dynamic mathematical model of tuberculosis vaccination |
title_fullStr | Updating age-specific contact structures to match evolving demography in a dynamic mathematical model of tuberculosis vaccination |
title_full_unstemmed | Updating age-specific contact structures to match evolving demography in a dynamic mathematical model of tuberculosis vaccination |
title_short | Updating age-specific contact structures to match evolving demography in a dynamic mathematical model of tuberculosis vaccination |
title_sort | updating age-specific contact structures to match evolving demography in a dynamic mathematical model of tuberculosis vaccination |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9067655/ https://www.ncbi.nlm.nih.gov/pubmed/35452459 http://dx.doi.org/10.1371/journal.pcbi.1010002 |
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