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Synthetic biology and bioelectrochemical tools for electrogenetic system engineering

Synthetic biology research and its industrial applications rely on deterministic spatiotemporal control of gene expression. Recently, electrochemical control of gene expression has been demonstrated in electrogenetic systems (redox-responsive promoters used alongside redox inducers and electrodes),...

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Autores principales: Lawrence, Joshua M., Yin, Yutong, Bombelli, Paolo, Scarampi, Alberto, Storch, Marko, Wey, Laura T., Climent-Catala, Alicia, Baldwin, Geoff S., O’Hare, Danny, Howe, Christopher J., Zhang, Jenny Z., Ouldridge, Thomas E., Ledesma-Amaro, Rodrigo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9067924/
https://www.ncbi.nlm.nih.gov/pubmed/35507663
http://dx.doi.org/10.1126/sciadv.abm5091
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author Lawrence, Joshua M.
Yin, Yutong
Bombelli, Paolo
Scarampi, Alberto
Storch, Marko
Wey, Laura T.
Climent-Catala, Alicia
Baldwin, Geoff S.
O’Hare, Danny
Howe, Christopher J.
Zhang, Jenny Z.
Ouldridge, Thomas E.
Ledesma-Amaro, Rodrigo
author_facet Lawrence, Joshua M.
Yin, Yutong
Bombelli, Paolo
Scarampi, Alberto
Storch, Marko
Wey, Laura T.
Climent-Catala, Alicia
Baldwin, Geoff S.
O’Hare, Danny
Howe, Christopher J.
Zhang, Jenny Z.
Ouldridge, Thomas E.
Ledesma-Amaro, Rodrigo
author_sort Lawrence, Joshua M.
collection PubMed
description Synthetic biology research and its industrial applications rely on deterministic spatiotemporal control of gene expression. Recently, electrochemical control of gene expression has been demonstrated in electrogenetic systems (redox-responsive promoters used alongside redox inducers and electrodes), allowing for the direct integration of electronics with biological processes. However, the use of electrogenetic systems is limited by poor activity, tunability, and standardization. In this work, we developed a strong, unidirectional, redox-responsive promoter before deriving a mutant promoter library with a spectrum of strengths. We constructed genetic circuits with these parts and demonstrated their activation by multiple classes of redox molecules. Last, we demonstrated electrochemical activation of gene expression under aerobic conditions using a novel, modular bioelectrochemical device. These genetic and electrochemical tools facilitate the design and improve the performance of electrogenetic systems. Furthermore, the genetic design strategies used can be applied to other redox-responsive promoters to further expand the available tools for electrogenetics.
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spelling pubmed-90679242022-05-13 Synthetic biology and bioelectrochemical tools for electrogenetic system engineering Lawrence, Joshua M. Yin, Yutong Bombelli, Paolo Scarampi, Alberto Storch, Marko Wey, Laura T. Climent-Catala, Alicia Baldwin, Geoff S. O’Hare, Danny Howe, Christopher J. Zhang, Jenny Z. Ouldridge, Thomas E. Ledesma-Amaro, Rodrigo Sci Adv Biomedicine and Life Sciences Synthetic biology research and its industrial applications rely on deterministic spatiotemporal control of gene expression. Recently, electrochemical control of gene expression has been demonstrated in electrogenetic systems (redox-responsive promoters used alongside redox inducers and electrodes), allowing for the direct integration of electronics with biological processes. However, the use of electrogenetic systems is limited by poor activity, tunability, and standardization. In this work, we developed a strong, unidirectional, redox-responsive promoter before deriving a mutant promoter library with a spectrum of strengths. We constructed genetic circuits with these parts and demonstrated their activation by multiple classes of redox molecules. Last, we demonstrated electrochemical activation of gene expression under aerobic conditions using a novel, modular bioelectrochemical device. These genetic and electrochemical tools facilitate the design and improve the performance of electrogenetic systems. Furthermore, the genetic design strategies used can be applied to other redox-responsive promoters to further expand the available tools for electrogenetics. American Association for the Advancement of Science 2022-05-04 /pmc/articles/PMC9067924/ /pubmed/35507663 http://dx.doi.org/10.1126/sciadv.abm5091 Text en Copyright © 2022 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY). https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution license (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Biomedicine and Life Sciences
Lawrence, Joshua M.
Yin, Yutong
Bombelli, Paolo
Scarampi, Alberto
Storch, Marko
Wey, Laura T.
Climent-Catala, Alicia
Baldwin, Geoff S.
O’Hare, Danny
Howe, Christopher J.
Zhang, Jenny Z.
Ouldridge, Thomas E.
Ledesma-Amaro, Rodrigo
Synthetic biology and bioelectrochemical tools for electrogenetic system engineering
title Synthetic biology and bioelectrochemical tools for electrogenetic system engineering
title_full Synthetic biology and bioelectrochemical tools for electrogenetic system engineering
title_fullStr Synthetic biology and bioelectrochemical tools for electrogenetic system engineering
title_full_unstemmed Synthetic biology and bioelectrochemical tools for electrogenetic system engineering
title_short Synthetic biology and bioelectrochemical tools for electrogenetic system engineering
title_sort synthetic biology and bioelectrochemical tools for electrogenetic system engineering
topic Biomedicine and Life Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9067924/
https://www.ncbi.nlm.nih.gov/pubmed/35507663
http://dx.doi.org/10.1126/sciadv.abm5091
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