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Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae)
The phylogenetic relationships among Micranthes taxa remain unclear due to their diversification. Here, we report the complete chloroplast genome of Micranthes melanocentra obtained using high-throughput sequencing technology to provide genomic information for phylogenetic analyses. The plastome is...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9068006/ https://www.ncbi.nlm.nih.gov/pubmed/35528254 http://dx.doi.org/10.1080/23802359.2022.2069523 |
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author | Li, Jianfang Liu, Zhan-Lin |
author_facet | Li, Jianfang Liu, Zhan-Lin |
author_sort | Li, Jianfang |
collection | PubMed |
description | The phylogenetic relationships among Micranthes taxa remain unclear due to their diversification. Here, we report the complete chloroplast genome of Micranthes melanocentra obtained using high-throughput sequencing technology to provide genomic information for phylogenetic analyses. The plastome is 155,317 bp, with a large single-copy region (LSC) of 86,784 bp, a small single-copy region (SSC) of 18,007 bp, and a pair of 25,263 bp inverted repeat regions (IRs). The genome contains 132 genes, including 86 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 1 pseudogene. The GC content of the plastome is 37.9%; corresponding values in the LSC, SSC, and IR regions are 36.1%, 31.9%, and 43.3%, respectively. The phylogenetic tree supports the separation of Micranthes from Saxifraga s.l. |
format | Online Article Text |
id | pubmed-9068006 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-90680062022-05-05 Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae) Li, Jianfang Liu, Zhan-Lin Mitochondrial DNA B Resour Plastome Announcement The phylogenetic relationships among Micranthes taxa remain unclear due to their diversification. Here, we report the complete chloroplast genome of Micranthes melanocentra obtained using high-throughput sequencing technology to provide genomic information for phylogenetic analyses. The plastome is 155,317 bp, with a large single-copy region (LSC) of 86,784 bp, a small single-copy region (SSC) of 18,007 bp, and a pair of 25,263 bp inverted repeat regions (IRs). The genome contains 132 genes, including 86 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 1 pseudogene. The GC content of the plastome is 37.9%; corresponding values in the LSC, SSC, and IR regions are 36.1%, 31.9%, and 43.3%, respectively. The phylogenetic tree supports the separation of Micranthes from Saxifraga s.l. Taylor & Francis 2022-05-03 /pmc/articles/PMC9068006/ /pubmed/35528254 http://dx.doi.org/10.1080/23802359.2022.2069523 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Plastome Announcement Li, Jianfang Liu, Zhan-Lin Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae) |
title | Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae) |
title_full | Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae) |
title_fullStr | Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae) |
title_full_unstemmed | Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae) |
title_short | Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae) |
title_sort | complete chloroplast genome sequence of micranthes melanocentra (saxifragaceae) |
topic | Plastome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9068006/ https://www.ncbi.nlm.nih.gov/pubmed/35528254 http://dx.doi.org/10.1080/23802359.2022.2069523 |
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