Cargando…

Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae)

The phylogenetic relationships among Micranthes taxa remain unclear due to their diversification. Here, we report the complete chloroplast genome of Micranthes melanocentra obtained using high-throughput sequencing technology to provide genomic information for phylogenetic analyses. The plastome is...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Jianfang, Liu, Zhan-Lin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9068006/
https://www.ncbi.nlm.nih.gov/pubmed/35528254
http://dx.doi.org/10.1080/23802359.2022.2069523
_version_ 1784700136340848640
author Li, Jianfang
Liu, Zhan-Lin
author_facet Li, Jianfang
Liu, Zhan-Lin
author_sort Li, Jianfang
collection PubMed
description The phylogenetic relationships among Micranthes taxa remain unclear due to their diversification. Here, we report the complete chloroplast genome of Micranthes melanocentra obtained using high-throughput sequencing technology to provide genomic information for phylogenetic analyses. The plastome is 155,317 bp, with a large single-copy region (LSC) of 86,784 bp, a small single-copy region (SSC) of 18,007 bp, and a pair of 25,263 bp inverted repeat regions (IRs). The genome contains 132 genes, including 86 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 1 pseudogene. The GC content of the plastome is 37.9%; corresponding values in the LSC, SSC, and IR regions are 36.1%, 31.9%, and 43.3%, respectively. The phylogenetic tree supports the separation of Micranthes from Saxifraga s.l.
format Online
Article
Text
id pubmed-9068006
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-90680062022-05-05 Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae) Li, Jianfang Liu, Zhan-Lin Mitochondrial DNA B Resour Plastome Announcement The phylogenetic relationships among Micranthes taxa remain unclear due to their diversification. Here, we report the complete chloroplast genome of Micranthes melanocentra obtained using high-throughput sequencing technology to provide genomic information for phylogenetic analyses. The plastome is 155,317 bp, with a large single-copy region (LSC) of 86,784 bp, a small single-copy region (SSC) of 18,007 bp, and a pair of 25,263 bp inverted repeat regions (IRs). The genome contains 132 genes, including 86 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 1 pseudogene. The GC content of the plastome is 37.9%; corresponding values in the LSC, SSC, and IR regions are 36.1%, 31.9%, and 43.3%, respectively. The phylogenetic tree supports the separation of Micranthes from Saxifraga s.l. Taylor & Francis 2022-05-03 /pmc/articles/PMC9068006/ /pubmed/35528254 http://dx.doi.org/10.1080/23802359.2022.2069523 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Li, Jianfang
Liu, Zhan-Lin
Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae)
title Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae)
title_full Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae)
title_fullStr Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae)
title_full_unstemmed Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae)
title_short Complete chloroplast genome sequence of Micranthes melanocentra (Saxifragaceae)
title_sort complete chloroplast genome sequence of micranthes melanocentra (saxifragaceae)
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9068006/
https://www.ncbi.nlm.nih.gov/pubmed/35528254
http://dx.doi.org/10.1080/23802359.2022.2069523
work_keys_str_mv AT lijianfang completechloroplastgenomesequenceofmicranthesmelanocentrasaxifragaceae
AT liuzhanlin completechloroplastgenomesequenceofmicranthesmelanocentrasaxifragaceae