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Internal validation and comparison of predictive models to determine success rate of infertility treatments: a retrospective study of 2485 cycles
Infertility is a significant health problem and assisted reproductive technologies to treat infertility. Despite all efforts, the success rate of these methods is still low. Also, each of these methods has side effects and costs. Therefore, accurate prediction of treatment success rate is a clinical...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9068696/ https://www.ncbi.nlm.nih.gov/pubmed/35508641 http://dx.doi.org/10.1038/s41598-022-10902-9 |
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author | Mehrjerd, Ameneh Rezaei, Hassan Eslami, Saeid Ratna, Mariam Begum Khadem Ghaebi, Nayyere |
author_facet | Mehrjerd, Ameneh Rezaei, Hassan Eslami, Saeid Ratna, Mariam Begum Khadem Ghaebi, Nayyere |
author_sort | Mehrjerd, Ameneh |
collection | PubMed |
description | Infertility is a significant health problem and assisted reproductive technologies to treat infertility. Despite all efforts, the success rate of these methods is still low. Also, each of these methods has side effects and costs. Therefore, accurate prediction of treatment success rate is a clinical challenge. This retrospective study aimed to internally validate and compare various machine learning models for predicting the clinical pregnancy rate (CPR) of infertility treatment. For this purpose, data from 1931 patients consisting of in vitro fertilization (IVF) or intra cytoplasmic sperm injection (ICSI) (733) and intra uterine insemination (IUI) (1196) treatments were included. Also, no egg or sperm donation data were used. The performance of machine learning algorithms to predict clinical pregnancy were expressed in terms of accuracy, recall, F-score, positive predictive value (PPV), brier score (BS), Matthew correlation coefficient (MCC), and receiver operating characteristic. The significance of the features with CPR and AUCs was evaluated by Student's t test and DeLong’s algorithm. Random forest (RF) model had the highest accuracy in the IVF/ICSI treatment. The sensitivity, F1 score, PPV, and MCC of the RF model were 0.76, 0.73, 0.80, and 0.5, respectively. These values for IUI treatment were 0.84, 0.80, 0.82, and 0.34, respectively. The BS was 0.13 and 0.15 for IVF/ICS and IUI, respectively. In addition, the estimated AUCs of the RF model for IVF/ICS and IUI were 0.73 and 0.7, respectively. Some essential features were obtained based on RF ranking for the two datasets, including age, follicle stimulation hormone, endometrial thickness, and infertility duration. The results showed a strong relationship between clinical pregnancy and a woman's age. Also, endometrial thickness and the number of follicles decreased with increasing female age in both treatments. |
format | Online Article Text |
id | pubmed-9068696 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-90686962022-05-05 Internal validation and comparison of predictive models to determine success rate of infertility treatments: a retrospective study of 2485 cycles Mehrjerd, Ameneh Rezaei, Hassan Eslami, Saeid Ratna, Mariam Begum Khadem Ghaebi, Nayyere Sci Rep Article Infertility is a significant health problem and assisted reproductive technologies to treat infertility. Despite all efforts, the success rate of these methods is still low. Also, each of these methods has side effects and costs. Therefore, accurate prediction of treatment success rate is a clinical challenge. This retrospective study aimed to internally validate and compare various machine learning models for predicting the clinical pregnancy rate (CPR) of infertility treatment. For this purpose, data from 1931 patients consisting of in vitro fertilization (IVF) or intra cytoplasmic sperm injection (ICSI) (733) and intra uterine insemination (IUI) (1196) treatments were included. Also, no egg or sperm donation data were used. The performance of machine learning algorithms to predict clinical pregnancy were expressed in terms of accuracy, recall, F-score, positive predictive value (PPV), brier score (BS), Matthew correlation coefficient (MCC), and receiver operating characteristic. The significance of the features with CPR and AUCs was evaluated by Student's t test and DeLong’s algorithm. Random forest (RF) model had the highest accuracy in the IVF/ICSI treatment. The sensitivity, F1 score, PPV, and MCC of the RF model were 0.76, 0.73, 0.80, and 0.5, respectively. These values for IUI treatment were 0.84, 0.80, 0.82, and 0.34, respectively. The BS was 0.13 and 0.15 for IVF/ICS and IUI, respectively. In addition, the estimated AUCs of the RF model for IVF/ICS and IUI were 0.73 and 0.7, respectively. Some essential features were obtained based on RF ranking for the two datasets, including age, follicle stimulation hormone, endometrial thickness, and infertility duration. The results showed a strong relationship between clinical pregnancy and a woman's age. Also, endometrial thickness and the number of follicles decreased with increasing female age in both treatments. Nature Publishing Group UK 2022-05-04 /pmc/articles/PMC9068696/ /pubmed/35508641 http://dx.doi.org/10.1038/s41598-022-10902-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Mehrjerd, Ameneh Rezaei, Hassan Eslami, Saeid Ratna, Mariam Begum Khadem Ghaebi, Nayyere Internal validation and comparison of predictive models to determine success rate of infertility treatments: a retrospective study of 2485 cycles |
title | Internal validation and comparison of predictive models to determine success rate of infertility treatments: a retrospective study of 2485 cycles |
title_full | Internal validation and comparison of predictive models to determine success rate of infertility treatments: a retrospective study of 2485 cycles |
title_fullStr | Internal validation and comparison of predictive models to determine success rate of infertility treatments: a retrospective study of 2485 cycles |
title_full_unstemmed | Internal validation and comparison of predictive models to determine success rate of infertility treatments: a retrospective study of 2485 cycles |
title_short | Internal validation and comparison of predictive models to determine success rate of infertility treatments: a retrospective study of 2485 cycles |
title_sort | internal validation and comparison of predictive models to determine success rate of infertility treatments: a retrospective study of 2485 cycles |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9068696/ https://www.ncbi.nlm.nih.gov/pubmed/35508641 http://dx.doi.org/10.1038/s41598-022-10902-9 |
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