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Gaur genome reveals expansion of sperm odorant receptors in domesticated cattle
BACKGROUND: The gaur (Bos gaurus) is the largest extant wild bovine species, native to South and Southeast Asia, with unique traits, and is listed as vulnerable by the International Union for Conservation of Nature (IUCN). RESULTS: We report the first gaur reference genome and identify three biologi...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9069736/ https://www.ncbi.nlm.nih.gov/pubmed/35508966 http://dx.doi.org/10.1186/s12864-022-08561-1 |
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author | Low, Wai Yee Rosen, Benjamin D. Ren, Yan Bickhart, Derek M. To, Thu-Hien Martin, Fergal J. Billis, Konstantinos Sonstegard, Tad S. Sullivan, Shawn T. Hiendleder, Stefan Williams, John L. Heaton, Michael P. Smith, Timothy P. L. |
author_facet | Low, Wai Yee Rosen, Benjamin D. Ren, Yan Bickhart, Derek M. To, Thu-Hien Martin, Fergal J. Billis, Konstantinos Sonstegard, Tad S. Sullivan, Shawn T. Hiendleder, Stefan Williams, John L. Heaton, Michael P. Smith, Timothy P. L. |
author_sort | Low, Wai Yee |
collection | PubMed |
description | BACKGROUND: The gaur (Bos gaurus) is the largest extant wild bovine species, native to South and Southeast Asia, with unique traits, and is listed as vulnerable by the International Union for Conservation of Nature (IUCN). RESULTS: We report the first gaur reference genome and identify three biological pathways including lysozyme activity, proton transmembrane transporter activity, and oxygen transport with significant changes in gene copy number in gaur compared to other mammals. These may reflect adaptation to challenges related to climate and nutrition. Comparative analyses with domesticated indicine (Bos indicus) and taurine (Bos taurus) cattle revealed genomic signatures of artificial selection, including the expansion of sperm odorant receptor genes in domesticated cattle, which may have important implications for understanding selection for male fertility. CONCLUSIONS: Apart from aiding dissection of economically important traits, the gaur genome will also provide the foundation to conserve the species. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-022-08561-1. |
format | Online Article Text |
id | pubmed-9069736 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-90697362022-05-05 Gaur genome reveals expansion of sperm odorant receptors in domesticated cattle Low, Wai Yee Rosen, Benjamin D. Ren, Yan Bickhart, Derek M. To, Thu-Hien Martin, Fergal J. Billis, Konstantinos Sonstegard, Tad S. Sullivan, Shawn T. Hiendleder, Stefan Williams, John L. Heaton, Michael P. Smith, Timothy P. L. BMC Genomics Research BACKGROUND: The gaur (Bos gaurus) is the largest extant wild bovine species, native to South and Southeast Asia, with unique traits, and is listed as vulnerable by the International Union for Conservation of Nature (IUCN). RESULTS: We report the first gaur reference genome and identify three biological pathways including lysozyme activity, proton transmembrane transporter activity, and oxygen transport with significant changes in gene copy number in gaur compared to other mammals. These may reflect adaptation to challenges related to climate and nutrition. Comparative analyses with domesticated indicine (Bos indicus) and taurine (Bos taurus) cattle revealed genomic signatures of artificial selection, including the expansion of sperm odorant receptor genes in domesticated cattle, which may have important implications for understanding selection for male fertility. CONCLUSIONS: Apart from aiding dissection of economically important traits, the gaur genome will also provide the foundation to conserve the species. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-022-08561-1. BioMed Central 2022-05-04 /pmc/articles/PMC9069736/ /pubmed/35508966 http://dx.doi.org/10.1186/s12864-022-08561-1 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Low, Wai Yee Rosen, Benjamin D. Ren, Yan Bickhart, Derek M. To, Thu-Hien Martin, Fergal J. Billis, Konstantinos Sonstegard, Tad S. Sullivan, Shawn T. Hiendleder, Stefan Williams, John L. Heaton, Michael P. Smith, Timothy P. L. Gaur genome reveals expansion of sperm odorant receptors in domesticated cattle |
title | Gaur genome reveals expansion of sperm odorant receptors in domesticated cattle |
title_full | Gaur genome reveals expansion of sperm odorant receptors in domesticated cattle |
title_fullStr | Gaur genome reveals expansion of sperm odorant receptors in domesticated cattle |
title_full_unstemmed | Gaur genome reveals expansion of sperm odorant receptors in domesticated cattle |
title_short | Gaur genome reveals expansion of sperm odorant receptors in domesticated cattle |
title_sort | gaur genome reveals expansion of sperm odorant receptors in domesticated cattle |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9069736/ https://www.ncbi.nlm.nih.gov/pubmed/35508966 http://dx.doi.org/10.1186/s12864-022-08561-1 |
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