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Comprehensive molecular characterization of hypertension-related genes in cancer
BACKGROUND: During cancer treatment, patients have a significantly higher risk of developing cardiovascular complications such as hypertension. In this study, we investigated the internal relationships between hypertension and different types of cancer. METHODS: First, we comprehensively characteriz...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9069779/ https://www.ncbi.nlm.nih.gov/pubmed/35513851 http://dx.doi.org/10.1186/s40959-022-00136-z |
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author | Jiang, Yanan Shi, Chunpeng Tian, Songyu Zhi, Fengnan Shen, Xiuyun Shang, Desi Tian, Jinwei |
author_facet | Jiang, Yanan Shi, Chunpeng Tian, Songyu Zhi, Fengnan Shen, Xiuyun Shang, Desi Tian, Jinwei |
author_sort | Jiang, Yanan |
collection | PubMed |
description | BACKGROUND: During cancer treatment, patients have a significantly higher risk of developing cardiovascular complications such as hypertension. In this study, we investigated the internal relationships between hypertension and different types of cancer. METHODS: First, we comprehensively characterized the involvement of 10 hypertension-related genes across 33 types of cancer. The somatic copy number alteration (CNA) and single nucleotide variant (SNV) of each gene were identified for each type of cancer. Then, the expression patterns of hypertension-related genes were analyzed across 14 types of cancer. The hypertension-related genes were aberrantly expressed in different types of cancer, and some were associated with the overall survival of patients or the cancer stage. Subsequently, the interactions between hypertension-related genes and clinically actionable genes (CAGs) were identified by analyzing the co-expressions and protein–protein interactions. RESULTS: We found that certain hypertension-related genes were correlated with CAGs. Next, the pathways associated with hypertension-related genes were identified. The positively correlated pathways included epithelial to mesenchymal transition, hormone androgen receptor, and receptor tyrosine kinase, and the negatively correlated pathways included apoptosis, cell cycle, and DNA damage response. Finally, the correlations between hypertension-related genes and drug sensitivity were evaluated for different drugs and different types of cancer. The hypertension-related genes were all positively or negatively correlated with the resistance of cancer to the majority of anti-cancer drugs. These results highlight the importance of hypertension-related genes in cancer. CONCLUSIONS: This study provides an approach to characterize the relationship between hypertension-related genes and cancers in the post-genomic era. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s40959-022-00136-z. |
format | Online Article Text |
id | pubmed-9069779 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-90697792022-05-05 Comprehensive molecular characterization of hypertension-related genes in cancer Jiang, Yanan Shi, Chunpeng Tian, Songyu Zhi, Fengnan Shen, Xiuyun Shang, Desi Tian, Jinwei Cardiooncology Research BACKGROUND: During cancer treatment, patients have a significantly higher risk of developing cardiovascular complications such as hypertension. In this study, we investigated the internal relationships between hypertension and different types of cancer. METHODS: First, we comprehensively characterized the involvement of 10 hypertension-related genes across 33 types of cancer. The somatic copy number alteration (CNA) and single nucleotide variant (SNV) of each gene were identified for each type of cancer. Then, the expression patterns of hypertension-related genes were analyzed across 14 types of cancer. The hypertension-related genes were aberrantly expressed in different types of cancer, and some were associated with the overall survival of patients or the cancer stage. Subsequently, the interactions between hypertension-related genes and clinically actionable genes (CAGs) were identified by analyzing the co-expressions and protein–protein interactions. RESULTS: We found that certain hypertension-related genes were correlated with CAGs. Next, the pathways associated with hypertension-related genes were identified. The positively correlated pathways included epithelial to mesenchymal transition, hormone androgen receptor, and receptor tyrosine kinase, and the negatively correlated pathways included apoptosis, cell cycle, and DNA damage response. Finally, the correlations between hypertension-related genes and drug sensitivity were evaluated for different drugs and different types of cancer. The hypertension-related genes were all positively or negatively correlated with the resistance of cancer to the majority of anti-cancer drugs. These results highlight the importance of hypertension-related genes in cancer. CONCLUSIONS: This study provides an approach to characterize the relationship between hypertension-related genes and cancers in the post-genomic era. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s40959-022-00136-z. BioMed Central 2022-05-05 /pmc/articles/PMC9069779/ /pubmed/35513851 http://dx.doi.org/10.1186/s40959-022-00136-z Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Jiang, Yanan Shi, Chunpeng Tian, Songyu Zhi, Fengnan Shen, Xiuyun Shang, Desi Tian, Jinwei Comprehensive molecular characterization of hypertension-related genes in cancer |
title | Comprehensive molecular characterization of hypertension-related genes in cancer |
title_full | Comprehensive molecular characterization of hypertension-related genes in cancer |
title_fullStr | Comprehensive molecular characterization of hypertension-related genes in cancer |
title_full_unstemmed | Comprehensive molecular characterization of hypertension-related genes in cancer |
title_short | Comprehensive molecular characterization of hypertension-related genes in cancer |
title_sort | comprehensive molecular characterization of hypertension-related genes in cancer |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9069779/ https://www.ncbi.nlm.nih.gov/pubmed/35513851 http://dx.doi.org/10.1186/s40959-022-00136-z |
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