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Signal amplification method for miR-205 assay through combining graphene oxide with duplex-specific nuclease

Since microRNA-205 (miR-205) is a predictive biomarker for anti-radiation of nasopharyngeal carcinoma (NPC), quantitative detection of miR-205 is important for developing personalized strategies for the treatment of NPC. In this investigation, based on the graphene oxide sensor and duplex specific n...

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Autores principales: Yang, Zhaoqi, Qin, Lan, Yang, Dutao, Chen, Weixia, Qian, Yue, Jin, Jian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9070658/
https://www.ncbi.nlm.nih.gov/pubmed/35529221
http://dx.doi.org/10.1039/c9ra04663a
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author Yang, Zhaoqi
Qin, Lan
Yang, Dutao
Chen, Weixia
Qian, Yue
Jin, Jian
author_facet Yang, Zhaoqi
Qin, Lan
Yang, Dutao
Chen, Weixia
Qian, Yue
Jin, Jian
author_sort Yang, Zhaoqi
collection PubMed
description Since microRNA-205 (miR-205) is a predictive biomarker for anti-radiation of nasopharyngeal carcinoma (NPC), quantitative detection of miR-205 is important for developing personalized strategies for the treatment of NPC. In this investigation, based on the graphene oxide sensor and duplex specific nuclease (DSN) for fluorescence signal amplification, a highly sensitive detection method for miR-205 was designed. A target-recycling mechanism is employed, where a single miR-205 target triggers the cleavage of many DNA signal probes. The method shows the ability to analyze miR-205 in solution, and it can detect miR-205 at concentrations as low as 132 pmol L(−1) with a linear range of 5–40 nmol L(−1). Furthermore, the method is specific in that it distinguishes between a target miRNA and a sequence with single base, double base and three base mismatches, as well as other miRNAs. Considering simplicity and excellent sensitivity/specificity, it is promising for applications in radioresistance studies as well as the early clinical diagnosis of NPC.
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spelling pubmed-90706582022-05-05 Signal amplification method for miR-205 assay through combining graphene oxide with duplex-specific nuclease Yang, Zhaoqi Qin, Lan Yang, Dutao Chen, Weixia Qian, Yue Jin, Jian RSC Adv Chemistry Since microRNA-205 (miR-205) is a predictive biomarker for anti-radiation of nasopharyngeal carcinoma (NPC), quantitative detection of miR-205 is important for developing personalized strategies for the treatment of NPC. In this investigation, based on the graphene oxide sensor and duplex specific nuclease (DSN) for fluorescence signal amplification, a highly sensitive detection method for miR-205 was designed. A target-recycling mechanism is employed, where a single miR-205 target triggers the cleavage of many DNA signal probes. The method shows the ability to analyze miR-205 in solution, and it can detect miR-205 at concentrations as low as 132 pmol L(−1) with a linear range of 5–40 nmol L(−1). Furthermore, the method is specific in that it distinguishes between a target miRNA and a sequence with single base, double base and three base mismatches, as well as other miRNAs. Considering simplicity and excellent sensitivity/specificity, it is promising for applications in radioresistance studies as well as the early clinical diagnosis of NPC. The Royal Society of Chemistry 2019-08-30 /pmc/articles/PMC9070658/ /pubmed/35529221 http://dx.doi.org/10.1039/c9ra04663a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Yang, Zhaoqi
Qin, Lan
Yang, Dutao
Chen, Weixia
Qian, Yue
Jin, Jian
Signal amplification method for miR-205 assay through combining graphene oxide with duplex-specific nuclease
title Signal amplification method for miR-205 assay through combining graphene oxide with duplex-specific nuclease
title_full Signal amplification method for miR-205 assay through combining graphene oxide with duplex-specific nuclease
title_fullStr Signal amplification method for miR-205 assay through combining graphene oxide with duplex-specific nuclease
title_full_unstemmed Signal amplification method for miR-205 assay through combining graphene oxide with duplex-specific nuclease
title_short Signal amplification method for miR-205 assay through combining graphene oxide with duplex-specific nuclease
title_sort signal amplification method for mir-205 assay through combining graphene oxide with duplex-specific nuclease
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9070658/
https://www.ncbi.nlm.nih.gov/pubmed/35529221
http://dx.doi.org/10.1039/c9ra04663a
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