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K(ATP) channel dependent heart multiome atlas
Plasmalemmal ATP sensitive potassium (K(ATP)) channels are recognized metabolic sensors, yet their cellular reach is less well understood. Here, transgenic Kir6.2 null hearts devoid of the K(ATP) channel pore underwent multiomics surveillance and systems interrogation versus wildtype counterparts. D...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9072320/ https://www.ncbi.nlm.nih.gov/pubmed/35513538 http://dx.doi.org/10.1038/s41598-022-11323-4 |
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author | Arrell, D. Kent Park, Sungjo Yamada, Satsuki Alekseev, Alexey E. Garmany, Armin Jeon, Ryounghoon Vuckovic, Ivan Lindor, Jelena Zlatkovic Terzic, Andre |
author_facet | Arrell, D. Kent Park, Sungjo Yamada, Satsuki Alekseev, Alexey E. Garmany, Armin Jeon, Ryounghoon Vuckovic, Ivan Lindor, Jelena Zlatkovic Terzic, Andre |
author_sort | Arrell, D. Kent |
collection | PubMed |
description | Plasmalemmal ATP sensitive potassium (K(ATP)) channels are recognized metabolic sensors, yet their cellular reach is less well understood. Here, transgenic Kir6.2 null hearts devoid of the K(ATP) channel pore underwent multiomics surveillance and systems interrogation versus wildtype counterparts. Despite maintained organ performance, the knockout proteome deviated beyond a discrete loss of constitutive K(ATP) channel subunits. Multidimensional nano-flow liquid chromatography tandem mass spectrometry resolved 111 differentially expressed proteins and their expanded network neighborhood, dominated by metabolic process engagement. Independent multimodal chemometric gas and liquid chromatography mass spectrometry unveiled differential expression of over one quarter of measured metabolites discriminating the Kir6.2 deficient heart metabolome. Supervised class analogy ranking and unsupervised enrichment analysis prioritized nicotinamide adenine dinucleotide (NAD(+)), affirmed by extensive overrepresentation of NAD(+) associated circuitry. The remodeled metabolome and proteome revealed functional convergence and an integrated signature of disease susceptibility. Deciphered cardiac patterns were traceable in the corresponding plasma metabolome, with tissue concordant plasma changes offering surrogate metabolite markers of myocardial latent vulnerability. Thus, Kir6.2 deficit precipitates multiome reorganization, mapping a comprehensive atlas of the K(ATP) channel dependent landscape. |
format | Online Article Text |
id | pubmed-9072320 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-90723202022-05-07 K(ATP) channel dependent heart multiome atlas Arrell, D. Kent Park, Sungjo Yamada, Satsuki Alekseev, Alexey E. Garmany, Armin Jeon, Ryounghoon Vuckovic, Ivan Lindor, Jelena Zlatkovic Terzic, Andre Sci Rep Article Plasmalemmal ATP sensitive potassium (K(ATP)) channels are recognized metabolic sensors, yet their cellular reach is less well understood. Here, transgenic Kir6.2 null hearts devoid of the K(ATP) channel pore underwent multiomics surveillance and systems interrogation versus wildtype counterparts. Despite maintained organ performance, the knockout proteome deviated beyond a discrete loss of constitutive K(ATP) channel subunits. Multidimensional nano-flow liquid chromatography tandem mass spectrometry resolved 111 differentially expressed proteins and their expanded network neighborhood, dominated by metabolic process engagement. Independent multimodal chemometric gas and liquid chromatography mass spectrometry unveiled differential expression of over one quarter of measured metabolites discriminating the Kir6.2 deficient heart metabolome. Supervised class analogy ranking and unsupervised enrichment analysis prioritized nicotinamide adenine dinucleotide (NAD(+)), affirmed by extensive overrepresentation of NAD(+) associated circuitry. The remodeled metabolome and proteome revealed functional convergence and an integrated signature of disease susceptibility. Deciphered cardiac patterns were traceable in the corresponding plasma metabolome, with tissue concordant plasma changes offering surrogate metabolite markers of myocardial latent vulnerability. Thus, Kir6.2 deficit precipitates multiome reorganization, mapping a comprehensive atlas of the K(ATP) channel dependent landscape. Nature Publishing Group UK 2022-05-05 /pmc/articles/PMC9072320/ /pubmed/35513538 http://dx.doi.org/10.1038/s41598-022-11323-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Arrell, D. Kent Park, Sungjo Yamada, Satsuki Alekseev, Alexey E. Garmany, Armin Jeon, Ryounghoon Vuckovic, Ivan Lindor, Jelena Zlatkovic Terzic, Andre K(ATP) channel dependent heart multiome atlas |
title | K(ATP) channel dependent heart multiome atlas |
title_full | K(ATP) channel dependent heart multiome atlas |
title_fullStr | K(ATP) channel dependent heart multiome atlas |
title_full_unstemmed | K(ATP) channel dependent heart multiome atlas |
title_short | K(ATP) channel dependent heart multiome atlas |
title_sort | k(atp) channel dependent heart multiome atlas |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9072320/ https://www.ncbi.nlm.nih.gov/pubmed/35513538 http://dx.doi.org/10.1038/s41598-022-11323-4 |
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