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A risk score system based on a six-microRNA signature predicts the overall survival of patients with ovarian cancer
BACKGROUND: Ovarian cancer (OVC) is a devastating disease worldwide; therefore the identification of prognostic biomarkers is urgently needed. We aimed to determine a robust microRNA signature-based risk score system that could predict the overall survival (OS) of patients with OVC. METHODS: We extr...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9074233/ https://www.ncbi.nlm.nih.gov/pubmed/35513874 http://dx.doi.org/10.1186/s13048-022-00980-8 |
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author | Zhou, Min Wu, Tao Yuan, Yuan Dong, Shu-Juan Zhang, Zhi-Ming Wang, Yan Wang, Jing |
author_facet | Zhou, Min Wu, Tao Yuan, Yuan Dong, Shu-Juan Zhang, Zhi-Ming Wang, Yan Wang, Jing |
author_sort | Zhou, Min |
collection | PubMed |
description | BACKGROUND: Ovarian cancer (OVC) is a devastating disease worldwide; therefore the identification of prognostic biomarkers is urgently needed. We aimed to determine a robust microRNA signature-based risk score system that could predict the overall survival (OS) of patients with OVC. METHODS: We extracted the microRNA expression profiles and corresponding clinical data of 467 OVC patients from The Cancer Genome Atlas (TCGA) database and further divided this data into training, validation and complete cohorts. The key prognostic microRNAs for OVC were identified and evaluated by robust likelihood-based survival analysis (RLSA) and multivariable Cox regression. Time-dependent receiver operating characteristic (ROC) curves were then constructed to evaluate the prognostic performance of these microRNAs. A total of 172 ovarian cancer samples and 162 normal ovarian tissues were used to verify the credibility and accuracy of the selected markers of the TCGA cohort by quantitative real-time polymerase chain reaction (PCR). RESULTS: We successfully established a risk score system based on a six-microRNA signature (hsa-miR-3074-5p, hsa-miR-758-3p, hsa-miR-877-5p, hsa-miR-760, hsa-miR-342-5p, and hsa-miR-6509-5p). This microRNA based system is able to characterize patients as either high or low risk. The OS of OVC patients, with either high or low risk, was significantly different when compared in the training cohort (p < 0.001), the validation cohort (p < 0.001) and the complete cohort (p < 0.001). Analysis of clinical samples further demonstrated that these microRNAs were aberrantly expressed in OVC tissues. The six-miRNA-based signature was correlated with the prognosis of OVC patients (p < 0.001). CONCLUSIONS: The study established a novel risk score system that is predictive of patient prognosis and is a potentially useful guide for the personalized treatment of OVC patients. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13048-022-00980-8. |
format | Online Article Text |
id | pubmed-9074233 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-90742332022-05-07 A risk score system based on a six-microRNA signature predicts the overall survival of patients with ovarian cancer Zhou, Min Wu, Tao Yuan, Yuan Dong, Shu-Juan Zhang, Zhi-Ming Wang, Yan Wang, Jing J Ovarian Res Research BACKGROUND: Ovarian cancer (OVC) is a devastating disease worldwide; therefore the identification of prognostic biomarkers is urgently needed. We aimed to determine a robust microRNA signature-based risk score system that could predict the overall survival (OS) of patients with OVC. METHODS: We extracted the microRNA expression profiles and corresponding clinical data of 467 OVC patients from The Cancer Genome Atlas (TCGA) database and further divided this data into training, validation and complete cohorts. The key prognostic microRNAs for OVC were identified and evaluated by robust likelihood-based survival analysis (RLSA) and multivariable Cox regression. Time-dependent receiver operating characteristic (ROC) curves were then constructed to evaluate the prognostic performance of these microRNAs. A total of 172 ovarian cancer samples and 162 normal ovarian tissues were used to verify the credibility and accuracy of the selected markers of the TCGA cohort by quantitative real-time polymerase chain reaction (PCR). RESULTS: We successfully established a risk score system based on a six-microRNA signature (hsa-miR-3074-5p, hsa-miR-758-3p, hsa-miR-877-5p, hsa-miR-760, hsa-miR-342-5p, and hsa-miR-6509-5p). This microRNA based system is able to characterize patients as either high or low risk. The OS of OVC patients, with either high or low risk, was significantly different when compared in the training cohort (p < 0.001), the validation cohort (p < 0.001) and the complete cohort (p < 0.001). Analysis of clinical samples further demonstrated that these microRNAs were aberrantly expressed in OVC tissues. The six-miRNA-based signature was correlated with the prognosis of OVC patients (p < 0.001). CONCLUSIONS: The study established a novel risk score system that is predictive of patient prognosis and is a potentially useful guide for the personalized treatment of OVC patients. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13048-022-00980-8. BioMed Central 2022-05-06 /pmc/articles/PMC9074233/ /pubmed/35513874 http://dx.doi.org/10.1186/s13048-022-00980-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Zhou, Min Wu, Tao Yuan, Yuan Dong, Shu-Juan Zhang, Zhi-Ming Wang, Yan Wang, Jing A risk score system based on a six-microRNA signature predicts the overall survival of patients with ovarian cancer |
title | A risk score system based on a six-microRNA signature predicts the overall survival of patients with ovarian cancer |
title_full | A risk score system based on a six-microRNA signature predicts the overall survival of patients with ovarian cancer |
title_fullStr | A risk score system based on a six-microRNA signature predicts the overall survival of patients with ovarian cancer |
title_full_unstemmed | A risk score system based on a six-microRNA signature predicts the overall survival of patients with ovarian cancer |
title_short | A risk score system based on a six-microRNA signature predicts the overall survival of patients with ovarian cancer |
title_sort | risk score system based on a six-microrna signature predicts the overall survival of patients with ovarian cancer |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9074233/ https://www.ncbi.nlm.nih.gov/pubmed/35513874 http://dx.doi.org/10.1186/s13048-022-00980-8 |
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