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Information Extraction From Electronic Health Records to Predict Readmission Following Acute Myocardial Infarction: Does Natural Language Processing Using Clinical Notes Improve Prediction of Readmission?

BACKGROUND: Social risk factors influence rehospitalization rates yet are challenging to incorporate into prediction models. Integration of social risk factors using natural language processing (NLP) and machine learning could improve risk prediction of 30‐day readmission following an acute myocardi...

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Autores principales: Brown, Jeremiah R., Ricket, Iben M., Reeves, Ruth M., Shah, Rashmee U., Goodrich, Christine A., Gobbel, Glen, Stabler, Meagan E., Perkins, Amy M., Minter, Freneka, Cox, Kevin C., Dorn, Chad, Denton, Jason, Bray, Bruce E., Gouripeddi, Ramkiran, Higgins, John, Chapman, Wendy W., MacKenzie, Todd, Matheny, Michael E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9075435/
https://www.ncbi.nlm.nih.gov/pubmed/35322668
http://dx.doi.org/10.1161/JAHA.121.024198
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author Brown, Jeremiah R.
Ricket, Iben M.
Reeves, Ruth M.
Shah, Rashmee U.
Goodrich, Christine A.
Gobbel, Glen
Stabler, Meagan E.
Perkins, Amy M.
Minter, Freneka
Cox, Kevin C.
Dorn, Chad
Denton, Jason
Bray, Bruce E.
Gouripeddi, Ramkiran
Higgins, John
Chapman, Wendy W.
MacKenzie, Todd
Matheny, Michael E.
author_facet Brown, Jeremiah R.
Ricket, Iben M.
Reeves, Ruth M.
Shah, Rashmee U.
Goodrich, Christine A.
Gobbel, Glen
Stabler, Meagan E.
Perkins, Amy M.
Minter, Freneka
Cox, Kevin C.
Dorn, Chad
Denton, Jason
Bray, Bruce E.
Gouripeddi, Ramkiran
Higgins, John
Chapman, Wendy W.
MacKenzie, Todd
Matheny, Michael E.
author_sort Brown, Jeremiah R.
collection PubMed
description BACKGROUND: Social risk factors influence rehospitalization rates yet are challenging to incorporate into prediction models. Integration of social risk factors using natural language processing (NLP) and machine learning could improve risk prediction of 30‐day readmission following an acute myocardial infarction. METHODS AND RESULTS: Patients were enrolled into derivation and validation cohorts. The derivation cohort included inpatient discharges from Vanderbilt University Medical Center between January 1, 2007, and December 31, 2016, with a primary diagnosis of acute myocardial infarction, who were discharged alive, and not transferred from another facility. The validation cohort included patients from Dartmouth‐Hitchcock Health Center between April 2, 2011, and December 31, 2016, meeting the same eligibility criteria described above. Data from both sites were linked to Centers for Medicare & Medicaid Services administrative data to supplement 30‐day hospital readmissions. Clinical notes from each cohort were extracted, and an NLP model was deployed, counting mentions of 7 social risk factors. Five machine learning models were run using clinical and NLP‐derived variables. Model discrimination and calibration were assessed, and receiver operating characteristic comparison analyses were performed. The 30‐day rehospitalization rates among the derivation (n=6165) and validation (n=4024) cohorts were 15.1% (n=934) and 10.2% (n=412), respectively. The derivation models demonstrated no statistical improvement in model performance with the addition of the selected NLP‐derived social risk factors. CONCLUSIONS: Social risk factors extracted using NLP did not significantly improve 30‐day readmission prediction among hospitalized patients with acute myocardial infarction. Alternative methods are needed to capture social risk factors.
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spelling pubmed-90754352022-05-10 Information Extraction From Electronic Health Records to Predict Readmission Following Acute Myocardial Infarction: Does Natural Language Processing Using Clinical Notes Improve Prediction of Readmission? Brown, Jeremiah R. Ricket, Iben M. Reeves, Ruth M. Shah, Rashmee U. Goodrich, Christine A. Gobbel, Glen Stabler, Meagan E. Perkins, Amy M. Minter, Freneka Cox, Kevin C. Dorn, Chad Denton, Jason Bray, Bruce E. Gouripeddi, Ramkiran Higgins, John Chapman, Wendy W. MacKenzie, Todd Matheny, Michael E. J Am Heart Assoc Original Research BACKGROUND: Social risk factors influence rehospitalization rates yet are challenging to incorporate into prediction models. Integration of social risk factors using natural language processing (NLP) and machine learning could improve risk prediction of 30‐day readmission following an acute myocardial infarction. METHODS AND RESULTS: Patients were enrolled into derivation and validation cohorts. The derivation cohort included inpatient discharges from Vanderbilt University Medical Center between January 1, 2007, and December 31, 2016, with a primary diagnosis of acute myocardial infarction, who were discharged alive, and not transferred from another facility. The validation cohort included patients from Dartmouth‐Hitchcock Health Center between April 2, 2011, and December 31, 2016, meeting the same eligibility criteria described above. Data from both sites were linked to Centers for Medicare & Medicaid Services administrative data to supplement 30‐day hospital readmissions. Clinical notes from each cohort were extracted, and an NLP model was deployed, counting mentions of 7 social risk factors. Five machine learning models were run using clinical and NLP‐derived variables. Model discrimination and calibration were assessed, and receiver operating characteristic comparison analyses were performed. The 30‐day rehospitalization rates among the derivation (n=6165) and validation (n=4024) cohorts were 15.1% (n=934) and 10.2% (n=412), respectively. The derivation models demonstrated no statistical improvement in model performance with the addition of the selected NLP‐derived social risk factors. CONCLUSIONS: Social risk factors extracted using NLP did not significantly improve 30‐day readmission prediction among hospitalized patients with acute myocardial infarction. Alternative methods are needed to capture social risk factors. John Wiley and Sons Inc. 2022-03-24 /pmc/articles/PMC9075435/ /pubmed/35322668 http://dx.doi.org/10.1161/JAHA.121.024198 Text en © 2022 The Authors. Published on behalf of the American Heart Association, Inc., by Wiley. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Original Research
Brown, Jeremiah R.
Ricket, Iben M.
Reeves, Ruth M.
Shah, Rashmee U.
Goodrich, Christine A.
Gobbel, Glen
Stabler, Meagan E.
Perkins, Amy M.
Minter, Freneka
Cox, Kevin C.
Dorn, Chad
Denton, Jason
Bray, Bruce E.
Gouripeddi, Ramkiran
Higgins, John
Chapman, Wendy W.
MacKenzie, Todd
Matheny, Michael E.
Information Extraction From Electronic Health Records to Predict Readmission Following Acute Myocardial Infarction: Does Natural Language Processing Using Clinical Notes Improve Prediction of Readmission?
title Information Extraction From Electronic Health Records to Predict Readmission Following Acute Myocardial Infarction: Does Natural Language Processing Using Clinical Notes Improve Prediction of Readmission?
title_full Information Extraction From Electronic Health Records to Predict Readmission Following Acute Myocardial Infarction: Does Natural Language Processing Using Clinical Notes Improve Prediction of Readmission?
title_fullStr Information Extraction From Electronic Health Records to Predict Readmission Following Acute Myocardial Infarction: Does Natural Language Processing Using Clinical Notes Improve Prediction of Readmission?
title_full_unstemmed Information Extraction From Electronic Health Records to Predict Readmission Following Acute Myocardial Infarction: Does Natural Language Processing Using Clinical Notes Improve Prediction of Readmission?
title_short Information Extraction From Electronic Health Records to Predict Readmission Following Acute Myocardial Infarction: Does Natural Language Processing Using Clinical Notes Improve Prediction of Readmission?
title_sort information extraction from electronic health records to predict readmission following acute myocardial infarction: does natural language processing using clinical notes improve prediction of readmission?
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9075435/
https://www.ncbi.nlm.nih.gov/pubmed/35322668
http://dx.doi.org/10.1161/JAHA.121.024198
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