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The nature of G⋯E–Y σ(3c–4e) in o-Me(n)GCH(2)C(6)H(4)EY (Me(n)G = Me(2)N and MeE; E = O, S, Se and Te; Y = F, Cl, Br, EMe and Me) with contributions from CT and compliance constants in noncovalent G⋯E interactions

The intrinsic dynamic and static nature of G–*–E–*–Y σ(3c–4e) interactions was elucidated with the quantum theory of atoms in molecules dual functional analysis (QTAIM-DFA), employing o-Me(n)GCH(2)C(6)H(4)EY (Me(n)G = Me(2)N and MeE; E = O, S, Se and Te; Y = F, Cl, Br, I, EMe and Me). Asterisks (*)...

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Autores principales: Hayashi, Satoko, Nishide, Taro, Nakanishi, Waro, Sancineto, Luca, Santi, Claudio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9076098/
https://www.ncbi.nlm.nih.gov/pubmed/35540683
http://dx.doi.org/10.1039/c9ra09022c
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author Hayashi, Satoko
Nishide, Taro
Nakanishi, Waro
Sancineto, Luca
Santi, Claudio
author_facet Hayashi, Satoko
Nishide, Taro
Nakanishi, Waro
Sancineto, Luca
Santi, Claudio
author_sort Hayashi, Satoko
collection PubMed
description The intrinsic dynamic and static nature of G–*–E–*–Y σ(3c–4e) interactions was elucidated with the quantum theory of atoms in molecules dual functional analysis (QTAIM-DFA), employing o-Me(n)GCH(2)C(6)H(4)EY (Me(n)G = Me(2)N and MeE; E = O, S, Se and Te; Y = F, Cl, Br, I, EMe and Me). Asterisks (*) are employed to emphasize the existence of bond critical points (BCPs) on the bond paths (BPs), corresponding to the interactions in question. Data from the fully optimized structure correspond to the static nature of interactions. The dynamic nature is called the intrinsic dynamic nature if the perturbed structures are generated using the coordinates derived from the compliance constants. Basis sets of the Sapporo-TZP type with diffusion functions are employed for the heteroatoms at the MP2 level. The noncovalent G–*–E interactions in GEY σ(3c–4e) are predicted to demonstrate van der Waals bonding to CT-TBP (trigonal bipyramidal adduct formation through charge transfer) nature, while the E–*–Y bonds have the covalent nature. Some E–F bonds show strong ionic character when G–*–E is predicted to be stronger than E–*–Y. The contributions of the CT terms to the G–*–E interactions, evaluated with NBO, are discussed in relation to the predicted nature. The E(2) values based on NBO are strongly correlated to the compliance constants for the G–*–E interactions if suitably treated separately.
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spelling pubmed-90760982022-05-09 The nature of G⋯E–Y σ(3c–4e) in o-Me(n)GCH(2)C(6)H(4)EY (Me(n)G = Me(2)N and MeE; E = O, S, Se and Te; Y = F, Cl, Br, EMe and Me) with contributions from CT and compliance constants in noncovalent G⋯E interactions Hayashi, Satoko Nishide, Taro Nakanishi, Waro Sancineto, Luca Santi, Claudio RSC Adv Chemistry The intrinsic dynamic and static nature of G–*–E–*–Y σ(3c–4e) interactions was elucidated with the quantum theory of atoms in molecules dual functional analysis (QTAIM-DFA), employing o-Me(n)GCH(2)C(6)H(4)EY (Me(n)G = Me(2)N and MeE; E = O, S, Se and Te; Y = F, Cl, Br, I, EMe and Me). Asterisks (*) are employed to emphasize the existence of bond critical points (BCPs) on the bond paths (BPs), corresponding to the interactions in question. Data from the fully optimized structure correspond to the static nature of interactions. The dynamic nature is called the intrinsic dynamic nature if the perturbed structures are generated using the coordinates derived from the compliance constants. Basis sets of the Sapporo-TZP type with diffusion functions are employed for the heteroatoms at the MP2 level. The noncovalent G–*–E interactions in GEY σ(3c–4e) are predicted to demonstrate van der Waals bonding to CT-TBP (trigonal bipyramidal adduct formation through charge transfer) nature, while the E–*–Y bonds have the covalent nature. Some E–F bonds show strong ionic character when G–*–E is predicted to be stronger than E–*–Y. The contributions of the CT terms to the G–*–E interactions, evaluated with NBO, are discussed in relation to the predicted nature. The E(2) values based on NBO are strongly correlated to the compliance constants for the G–*–E interactions if suitably treated separately. The Royal Society of Chemistry 2019-11-29 /pmc/articles/PMC9076098/ /pubmed/35540683 http://dx.doi.org/10.1039/c9ra09022c Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Hayashi, Satoko
Nishide, Taro
Nakanishi, Waro
Sancineto, Luca
Santi, Claudio
The nature of G⋯E–Y σ(3c–4e) in o-Me(n)GCH(2)C(6)H(4)EY (Me(n)G = Me(2)N and MeE; E = O, S, Se and Te; Y = F, Cl, Br, EMe and Me) with contributions from CT and compliance constants in noncovalent G⋯E interactions
title The nature of G⋯E–Y σ(3c–4e) in o-Me(n)GCH(2)C(6)H(4)EY (Me(n)G = Me(2)N and MeE; E = O, S, Se and Te; Y = F, Cl, Br, EMe and Me) with contributions from CT and compliance constants in noncovalent G⋯E interactions
title_full The nature of G⋯E–Y σ(3c–4e) in o-Me(n)GCH(2)C(6)H(4)EY (Me(n)G = Me(2)N and MeE; E = O, S, Se and Te; Y = F, Cl, Br, EMe and Me) with contributions from CT and compliance constants in noncovalent G⋯E interactions
title_fullStr The nature of G⋯E–Y σ(3c–4e) in o-Me(n)GCH(2)C(6)H(4)EY (Me(n)G = Me(2)N and MeE; E = O, S, Se and Te; Y = F, Cl, Br, EMe and Me) with contributions from CT and compliance constants in noncovalent G⋯E interactions
title_full_unstemmed The nature of G⋯E–Y σ(3c–4e) in o-Me(n)GCH(2)C(6)H(4)EY (Me(n)G = Me(2)N and MeE; E = O, S, Se and Te; Y = F, Cl, Br, EMe and Me) with contributions from CT and compliance constants in noncovalent G⋯E interactions
title_short The nature of G⋯E–Y σ(3c–4e) in o-Me(n)GCH(2)C(6)H(4)EY (Me(n)G = Me(2)N and MeE; E = O, S, Se and Te; Y = F, Cl, Br, EMe and Me) with contributions from CT and compliance constants in noncovalent G⋯E interactions
title_sort nature of g⋯e–y σ(3c–4e) in o-me(n)gch(2)c(6)h(4)ey (me(n)g = me(2)n and mee; e = o, s, se and te; y = f, cl, br, eme and me) with contributions from ct and compliance constants in noncovalent g⋯e interactions
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9076098/
https://www.ncbi.nlm.nih.gov/pubmed/35540683
http://dx.doi.org/10.1039/c9ra09022c
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