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Spatial distribution and identification of potential risk regions to rice blast disease in different rice ecosystems of Karnataka
Rice is a globally important crop and highly vulnerable to rice blast disease (RBD). We studied the spatial distribution of RBD by considering the 2-year exploratory data from 120 sampling sites over varied rice ecosystems of Karnataka, India. Point pattern and surface interpolation analyses were pe...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9076900/ https://www.ncbi.nlm.nih.gov/pubmed/35523840 http://dx.doi.org/10.1038/s41598-022-11453-9 |
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author | Amoghavarsha, Chittaragi Pramesh, Devanna Sridhara, Shankarappa Patil, Balanagouda Shil, Sandip Naik, Ganesha R. Naik, Manjunath K. Shokralla, Shadi El-Sabrout, Ahmed M. Mahmoud, Eman A. Elansary, Hosam O. Nayak, Anusha Prasannakumar, Muthukapalli K. |
author_facet | Amoghavarsha, Chittaragi Pramesh, Devanna Sridhara, Shankarappa Patil, Balanagouda Shil, Sandip Naik, Ganesha R. Naik, Manjunath K. Shokralla, Shadi El-Sabrout, Ahmed M. Mahmoud, Eman A. Elansary, Hosam O. Nayak, Anusha Prasannakumar, Muthukapalli K. |
author_sort | Amoghavarsha, Chittaragi |
collection | PubMed |
description | Rice is a globally important crop and highly vulnerable to rice blast disease (RBD). We studied the spatial distribution of RBD by considering the 2-year exploratory data from 120 sampling sites over varied rice ecosystems of Karnataka, India. Point pattern and surface interpolation analyses were performed to identify the spatial distribution of RBD. The spatial clusters of RBD were generated by spatial autocorrelation and Ripley’s K function. Further, inverse distance weighting (IDW), ordinary kriging (OK), and indicator kriging (IK) approaches were utilized to generate spatial maps by predicting the values at unvisited locations using neighboring observations. Hierarchical cluster analysis using the average linkage method identified two main clusters of RBD severity. From the Local Moran’s I, most of the districts were clustered together (at I > 0), except the coastal and interior districts (at I < 0). Positive spatial dependency was observed in the Coastal, Hilly, Bhadra, and Upper Krishna Project ecosystems (p > 0.05), while Tungabhadra and Kaveri ecosystem districts were clustered together at p < 0.05. From the kriging, Hilly ecosystem, middle and southern parts of Karnataka were found vulnerable to RBD. This is the first intensive study in India on understanding the spatial distribution of RBD using geostatistical approaches, and the findings from this study help in setting up ecosystem-specific management strategies against RBD. |
format | Online Article Text |
id | pubmed-9076900 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-90769002022-05-08 Spatial distribution and identification of potential risk regions to rice blast disease in different rice ecosystems of Karnataka Amoghavarsha, Chittaragi Pramesh, Devanna Sridhara, Shankarappa Patil, Balanagouda Shil, Sandip Naik, Ganesha R. Naik, Manjunath K. Shokralla, Shadi El-Sabrout, Ahmed M. Mahmoud, Eman A. Elansary, Hosam O. Nayak, Anusha Prasannakumar, Muthukapalli K. Sci Rep Article Rice is a globally important crop and highly vulnerable to rice blast disease (RBD). We studied the spatial distribution of RBD by considering the 2-year exploratory data from 120 sampling sites over varied rice ecosystems of Karnataka, India. Point pattern and surface interpolation analyses were performed to identify the spatial distribution of RBD. The spatial clusters of RBD were generated by spatial autocorrelation and Ripley’s K function. Further, inverse distance weighting (IDW), ordinary kriging (OK), and indicator kriging (IK) approaches were utilized to generate spatial maps by predicting the values at unvisited locations using neighboring observations. Hierarchical cluster analysis using the average linkage method identified two main clusters of RBD severity. From the Local Moran’s I, most of the districts were clustered together (at I > 0), except the coastal and interior districts (at I < 0). Positive spatial dependency was observed in the Coastal, Hilly, Bhadra, and Upper Krishna Project ecosystems (p > 0.05), while Tungabhadra and Kaveri ecosystem districts were clustered together at p < 0.05. From the kriging, Hilly ecosystem, middle and southern parts of Karnataka were found vulnerable to RBD. This is the first intensive study in India on understanding the spatial distribution of RBD using geostatistical approaches, and the findings from this study help in setting up ecosystem-specific management strategies against RBD. Nature Publishing Group UK 2022-05-06 /pmc/articles/PMC9076900/ /pubmed/35523840 http://dx.doi.org/10.1038/s41598-022-11453-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Amoghavarsha, Chittaragi Pramesh, Devanna Sridhara, Shankarappa Patil, Balanagouda Shil, Sandip Naik, Ganesha R. Naik, Manjunath K. Shokralla, Shadi El-Sabrout, Ahmed M. Mahmoud, Eman A. Elansary, Hosam O. Nayak, Anusha Prasannakumar, Muthukapalli K. Spatial distribution and identification of potential risk regions to rice blast disease in different rice ecosystems of Karnataka |
title | Spatial distribution and identification of potential risk regions to rice blast disease in different rice ecosystems of Karnataka |
title_full | Spatial distribution and identification of potential risk regions to rice blast disease in different rice ecosystems of Karnataka |
title_fullStr | Spatial distribution and identification of potential risk regions to rice blast disease in different rice ecosystems of Karnataka |
title_full_unstemmed | Spatial distribution and identification of potential risk regions to rice blast disease in different rice ecosystems of Karnataka |
title_short | Spatial distribution and identification of potential risk regions to rice blast disease in different rice ecosystems of Karnataka |
title_sort | spatial distribution and identification of potential risk regions to rice blast disease in different rice ecosystems of karnataka |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9076900/ https://www.ncbi.nlm.nih.gov/pubmed/35523840 http://dx.doi.org/10.1038/s41598-022-11453-9 |
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