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Understanding the Research Landscape of Deep Learning in Biomedical Science: Scientometric Analysis

BACKGROUND: Advances in biomedical research using deep learning techniques have generated a large volume of related literature. However, there is a lack of scientometric studies that provide a bird’s-eye view of them. This absence has led to a partial and fragmented understanding of the field and it...

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Detalles Bibliográficos
Autores principales: Nam, Seojin, Kim, Donghun, Jung, Woojin, Zhu, Yongjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9077503/
https://www.ncbi.nlm.nih.gov/pubmed/35451980
http://dx.doi.org/10.2196/28114
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author Nam, Seojin
Kim, Donghun
Jung, Woojin
Zhu, Yongjun
author_facet Nam, Seojin
Kim, Donghun
Jung, Woojin
Zhu, Yongjun
author_sort Nam, Seojin
collection PubMed
description BACKGROUND: Advances in biomedical research using deep learning techniques have generated a large volume of related literature. However, there is a lack of scientometric studies that provide a bird’s-eye view of them. This absence has led to a partial and fragmented understanding of the field and its progress. OBJECTIVE: This study aimed to gain a quantitative and qualitative understanding of the scientific domain by analyzing diverse bibliographic entities that represent the research landscape from multiple perspectives and levels of granularity. METHODS: We searched and retrieved 978 deep learning studies in biomedicine from the PubMed database. A scientometric analysis was performed by analyzing the metadata, content of influential works, and cited references. RESULTS: In the process, we identified the current leading fields, major research topics and techniques, knowledge diffusion, and research collaboration. There was a predominant focus on applying deep learning, especially convolutional neural networks, to radiology and medical imaging, whereas a few studies focused on protein or genome analysis. Radiology and medical imaging also appeared to be the most significant knowledge sources and an important field in knowledge diffusion, followed by computer science and electrical engineering. A coauthorship analysis revealed various collaborations among engineering-oriented and biomedicine-oriented clusters of disciplines. CONCLUSIONS: This study investigated the landscape of deep learning research in biomedicine and confirmed its interdisciplinary nature. Although it has been successful, we believe that there is a need for diverse applications in certain areas to further boost the contributions of deep learning in addressing biomedical research problems. We expect the results of this study to help researchers and communities better align their present and future work.
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spelling pubmed-90775032022-05-08 Understanding the Research Landscape of Deep Learning in Biomedical Science: Scientometric Analysis Nam, Seojin Kim, Donghun Jung, Woojin Zhu, Yongjun J Med Internet Res Original Paper BACKGROUND: Advances in biomedical research using deep learning techniques have generated a large volume of related literature. However, there is a lack of scientometric studies that provide a bird’s-eye view of them. This absence has led to a partial and fragmented understanding of the field and its progress. OBJECTIVE: This study aimed to gain a quantitative and qualitative understanding of the scientific domain by analyzing diverse bibliographic entities that represent the research landscape from multiple perspectives and levels of granularity. METHODS: We searched and retrieved 978 deep learning studies in biomedicine from the PubMed database. A scientometric analysis was performed by analyzing the metadata, content of influential works, and cited references. RESULTS: In the process, we identified the current leading fields, major research topics and techniques, knowledge diffusion, and research collaboration. There was a predominant focus on applying deep learning, especially convolutional neural networks, to radiology and medical imaging, whereas a few studies focused on protein or genome analysis. Radiology and medical imaging also appeared to be the most significant knowledge sources and an important field in knowledge diffusion, followed by computer science and electrical engineering. A coauthorship analysis revealed various collaborations among engineering-oriented and biomedicine-oriented clusters of disciplines. CONCLUSIONS: This study investigated the landscape of deep learning research in biomedicine and confirmed its interdisciplinary nature. Although it has been successful, we believe that there is a need for diverse applications in certain areas to further boost the contributions of deep learning in addressing biomedical research problems. We expect the results of this study to help researchers and communities better align their present and future work. JMIR Publications 2022-04-22 /pmc/articles/PMC9077503/ /pubmed/35451980 http://dx.doi.org/10.2196/28114 Text en ©Seojin Nam, Donghun Kim, Woojin Jung, Yongjun Zhu. Originally published in the Journal of Medical Internet Research (https://www.jmir.org), 22.04.2022. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in the Journal of Medical Internet Research, is properly cited. The complete bibliographic information, a link to the original publication on https://www.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Nam, Seojin
Kim, Donghun
Jung, Woojin
Zhu, Yongjun
Understanding the Research Landscape of Deep Learning in Biomedical Science: Scientometric Analysis
title Understanding the Research Landscape of Deep Learning in Biomedical Science: Scientometric Analysis
title_full Understanding the Research Landscape of Deep Learning in Biomedical Science: Scientometric Analysis
title_fullStr Understanding the Research Landscape of Deep Learning in Biomedical Science: Scientometric Analysis
title_full_unstemmed Understanding the Research Landscape of Deep Learning in Biomedical Science: Scientometric Analysis
title_short Understanding the Research Landscape of Deep Learning in Biomedical Science: Scientometric Analysis
title_sort understanding the research landscape of deep learning in biomedical science: scientometric analysis
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9077503/
https://www.ncbi.nlm.nih.gov/pubmed/35451980
http://dx.doi.org/10.2196/28114
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