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Amplicon sequencing data profiling of bacterial community connected with the rhizospheric soil from sunflower plants

This article presents dataset on the bacterial community structure associated with rhizospheric sunflower soils from Lichtenburg, South Africa. The Illumina Miseq sequencing of 16S rRNA gene amplicon unveiled the bacterial community diversities as well as generated metagenomic library from sunflower...

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Detalles Bibliográficos
Autores principales: Babalola, Olubukola Oluranti, Nwachukwu, Blessing Chidinma, Ayangbenro, Ayansina Segun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9079167/
https://www.ncbi.nlm.nih.gov/pubmed/35539022
http://dx.doi.org/10.1016/j.dib.2022.108207
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author Babalola, Olubukola Oluranti
Nwachukwu, Blessing Chidinma
Ayangbenro, Ayansina Segun
author_facet Babalola, Olubukola Oluranti
Nwachukwu, Blessing Chidinma
Ayangbenro, Ayansina Segun
author_sort Babalola, Olubukola Oluranti
collection PubMed
description This article presents dataset on the bacterial community structure associated with rhizospheric sunflower soils from Lichtenburg, South Africa. The Illumina Miseq sequencing of 16S rRNA gene amplicon unveiled the bacterial community diversities as well as generated metagenomic library from sunflower rhizospheric soils to understand the diversities and distribution. The metagenome contained a total of 41,471 sequences with 45,975 operational taxonomic units (OTUs). Metagenome sequence information is obtainable at NCBI under the Bioproject assigned accession number PRJNA782103. Taxonomic hits distribution from USEARCH analysis at phylum level classification of BN_E discovered predominantly Actinobacteria (33.89%), followed by Proteobacteria (35.45%), Firmicutes (6.45%), Planctomycetes (4.12%), Chloroflexi (4.28%) and Gemmatimonadetes (2.40%). Also, USEARCH assisted analysis of BN_F sample also detected the prevalence of Actinobacteria (45.92%), Proteobacteria (23.23%), Firmicutes (3.84%), Planctomycetes (6.46%), Chloroflexi (4.94%) and Gemmatimonadetes (1.99%), which take part in vital ecological functions and biogeochemical activities needed for plant growth and health.
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spelling pubmed-90791672022-05-09 Amplicon sequencing data profiling of bacterial community connected with the rhizospheric soil from sunflower plants Babalola, Olubukola Oluranti Nwachukwu, Blessing Chidinma Ayangbenro, Ayansina Segun Data Brief Data Article This article presents dataset on the bacterial community structure associated with rhizospheric sunflower soils from Lichtenburg, South Africa. The Illumina Miseq sequencing of 16S rRNA gene amplicon unveiled the bacterial community diversities as well as generated metagenomic library from sunflower rhizospheric soils to understand the diversities and distribution. The metagenome contained a total of 41,471 sequences with 45,975 operational taxonomic units (OTUs). Metagenome sequence information is obtainable at NCBI under the Bioproject assigned accession number PRJNA782103. Taxonomic hits distribution from USEARCH analysis at phylum level classification of BN_E discovered predominantly Actinobacteria (33.89%), followed by Proteobacteria (35.45%), Firmicutes (6.45%), Planctomycetes (4.12%), Chloroflexi (4.28%) and Gemmatimonadetes (2.40%). Also, USEARCH assisted analysis of BN_F sample also detected the prevalence of Actinobacteria (45.92%), Proteobacteria (23.23%), Firmicutes (3.84%), Planctomycetes (6.46%), Chloroflexi (4.94%) and Gemmatimonadetes (1.99%), which take part in vital ecological functions and biogeochemical activities needed for plant growth and health. Elsevier 2022-04-26 /pmc/articles/PMC9079167/ /pubmed/35539022 http://dx.doi.org/10.1016/j.dib.2022.108207 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Babalola, Olubukola Oluranti
Nwachukwu, Blessing Chidinma
Ayangbenro, Ayansina Segun
Amplicon sequencing data profiling of bacterial community connected with the rhizospheric soil from sunflower plants
title Amplicon sequencing data profiling of bacterial community connected with the rhizospheric soil from sunflower plants
title_full Amplicon sequencing data profiling of bacterial community connected with the rhizospheric soil from sunflower plants
title_fullStr Amplicon sequencing data profiling of bacterial community connected with the rhizospheric soil from sunflower plants
title_full_unstemmed Amplicon sequencing data profiling of bacterial community connected with the rhizospheric soil from sunflower plants
title_short Amplicon sequencing data profiling of bacterial community connected with the rhizospheric soil from sunflower plants
title_sort amplicon sequencing data profiling of bacterial community connected with the rhizospheric soil from sunflower plants
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9079167/
https://www.ncbi.nlm.nih.gov/pubmed/35539022
http://dx.doi.org/10.1016/j.dib.2022.108207
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