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Importance of Linear Combination Modeling for Quantification of Glutathione and γ-Aminobutyric Acid Levels Using Hadamard-Edited Magnetic Resonance Spectroscopy
BACKGROUND: J-difference-edited (1)H-MR spectra require modeling to quantify signals of low-concentration metabolites. Two main approaches are used for this spectral modeling: simple peak fitting and linear combination modeling (LCM) with a simulated basis set. Recent consensus recommended LCM as th...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9082488/ https://www.ncbi.nlm.nih.gov/pubmed/35546940 http://dx.doi.org/10.3389/fpsyt.2022.872403 |
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author | Song, Yulu Zöllner, Helge J. Hui, Steve C. N. Hupfeld, Kathleen Oeltzschner, Georg Prisciandaro, James J. Edden, Richard |
author_facet | Song, Yulu Zöllner, Helge J. Hui, Steve C. N. Hupfeld, Kathleen Oeltzschner, Georg Prisciandaro, James J. Edden, Richard |
author_sort | Song, Yulu |
collection | PubMed |
description | BACKGROUND: J-difference-edited (1)H-MR spectra require modeling to quantify signals of low-concentration metabolites. Two main approaches are used for this spectral modeling: simple peak fitting and linear combination modeling (LCM) with a simulated basis set. Recent consensus recommended LCM as the method of choice for the spectral analysis of edited data. PURPOSE: The aim of this study is to compare the performance of simple peak fitting and LCM in a test-retest dataset, hypothesizing that the more sophisticated LCM approach would improve quantification of Hadamard-edited data compared with simple peak fitting. METHODS: A test–retest dataset was re-analyzed using Gannet (simple peak fitting) and Osprey (LCM). These data were obtained from the dorsal anterior cingulate cortex of twelve healthy volunteers, with TE = 80 ms for HERMES and TE = 120 ms for MEGA-PRESS of glutathione (GSH). Within-subject coefficients of variation (CVs) were calculated to quantify between-scan reproducibility of each metabolite estimate. RESULTS: The reproducibility of HERMES GSH estimates was substantially improved using LCM compared to simple peak fitting, from a CV of 19.0–9.9%. For MEGA-PRESS GSH data, reproducibility was similar using LCM and simple peak fitting, with CVs of 7.3 and 8.8%. GABA + CVs from HERMES were 16.7 and 15.2%, respectively for the two models. CONCLUSION: LCM with simulated basis functions substantially improved the reproducibility of GSH quantification for HERMES data. |
format | Online Article Text |
id | pubmed-9082488 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-90824882022-05-10 Importance of Linear Combination Modeling for Quantification of Glutathione and γ-Aminobutyric Acid Levels Using Hadamard-Edited Magnetic Resonance Spectroscopy Song, Yulu Zöllner, Helge J. Hui, Steve C. N. Hupfeld, Kathleen Oeltzschner, Georg Prisciandaro, James J. Edden, Richard Front Psychiatry Psychiatry BACKGROUND: J-difference-edited (1)H-MR spectra require modeling to quantify signals of low-concentration metabolites. Two main approaches are used for this spectral modeling: simple peak fitting and linear combination modeling (LCM) with a simulated basis set. Recent consensus recommended LCM as the method of choice for the spectral analysis of edited data. PURPOSE: The aim of this study is to compare the performance of simple peak fitting and LCM in a test-retest dataset, hypothesizing that the more sophisticated LCM approach would improve quantification of Hadamard-edited data compared with simple peak fitting. METHODS: A test–retest dataset was re-analyzed using Gannet (simple peak fitting) and Osprey (LCM). These data were obtained from the dorsal anterior cingulate cortex of twelve healthy volunteers, with TE = 80 ms for HERMES and TE = 120 ms for MEGA-PRESS of glutathione (GSH). Within-subject coefficients of variation (CVs) were calculated to quantify between-scan reproducibility of each metabolite estimate. RESULTS: The reproducibility of HERMES GSH estimates was substantially improved using LCM compared to simple peak fitting, from a CV of 19.0–9.9%. For MEGA-PRESS GSH data, reproducibility was similar using LCM and simple peak fitting, with CVs of 7.3 and 8.8%. GABA + CVs from HERMES were 16.7 and 15.2%, respectively for the two models. CONCLUSION: LCM with simulated basis functions substantially improved the reproducibility of GSH quantification for HERMES data. Frontiers Media S.A. 2022-04-25 /pmc/articles/PMC9082488/ /pubmed/35546940 http://dx.doi.org/10.3389/fpsyt.2022.872403 Text en Copyright © 2022 Song, Zöllner, Hui, Hupfeld, Oeltzschner, Prisciandaro and Edden. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Psychiatry Song, Yulu Zöllner, Helge J. Hui, Steve C. N. Hupfeld, Kathleen Oeltzschner, Georg Prisciandaro, James J. Edden, Richard Importance of Linear Combination Modeling for Quantification of Glutathione and γ-Aminobutyric Acid Levels Using Hadamard-Edited Magnetic Resonance Spectroscopy |
title | Importance of Linear Combination Modeling for Quantification of Glutathione and γ-Aminobutyric Acid Levels Using Hadamard-Edited Magnetic Resonance Spectroscopy |
title_full | Importance of Linear Combination Modeling for Quantification of Glutathione and γ-Aminobutyric Acid Levels Using Hadamard-Edited Magnetic Resonance Spectroscopy |
title_fullStr | Importance of Linear Combination Modeling for Quantification of Glutathione and γ-Aminobutyric Acid Levels Using Hadamard-Edited Magnetic Resonance Spectroscopy |
title_full_unstemmed | Importance of Linear Combination Modeling for Quantification of Glutathione and γ-Aminobutyric Acid Levels Using Hadamard-Edited Magnetic Resonance Spectroscopy |
title_short | Importance of Linear Combination Modeling for Quantification of Glutathione and γ-Aminobutyric Acid Levels Using Hadamard-Edited Magnetic Resonance Spectroscopy |
title_sort | importance of linear combination modeling for quantification of glutathione and γ-aminobutyric acid levels using hadamard-edited magnetic resonance spectroscopy |
topic | Psychiatry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9082488/ https://www.ncbi.nlm.nih.gov/pubmed/35546940 http://dx.doi.org/10.3389/fpsyt.2022.872403 |
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