Cargando…
Modular Pulse Program Generation for NMR Supersequences
[Image: see text] NMR supersequences allow multiple 2D NMR data sets to be acquired in greatly reduced experiment durations through tailored detection of NMR responses within concatenated modules. In NOAH (NMR by Ordered Acquisition using (1)H detection) experiments, up to five modules can be combin...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9082496/ https://www.ncbi.nlm.nih.gov/pubmed/35050622 http://dx.doi.org/10.1021/acs.analchem.1c04964 |
_version_ | 1784703216266510336 |
---|---|
author | Yong, Jonathan R. J. Kupče, E̅riks Claridge, Tim D. W. |
author_facet | Yong, Jonathan R. J. Kupče, E̅riks Claridge, Tim D. W. |
author_sort | Yong, Jonathan R. J. |
collection | PubMed |
description | [Image: see text] NMR supersequences allow multiple 2D NMR data sets to be acquired in greatly reduced experiment durations through tailored detection of NMR responses within concatenated modules. In NOAH (NMR by Ordered Acquisition using (1)H detection) experiments, up to five modules can be combined (or even more when parallel modules are employed), which in theory leads to thousands of plausible supersequences. However, constructing a pulse program for a supersequence is highly time-consuming, requires specialized knowledge, and is error-prone due to its complexity; this has prevented the true potential of the NOAH concept from being fully realized. We introduce here an online tool named GENESIS (GENEration of Supersequences In Silico), available via https://nmr-genesis.co.uk, which systematically generates pulse programs for arbitrary NOAH supersequences compatible with Bruker spectrometers. The GENESIS website provides a unified “one-stop” interface where users may obtain customized supersequences for specific applications, together with all associated acquisition and processing scripts, as well as detailed instructions for running NOAH experiments. Furthermore, it enables the rapid dissemination of new developments in NOAH sequences, such as new modules or improvements to existing modules. Here, we present several such enhancements, including options for solvent suppression, new modules based on pure shift NMR, and improved artifact reduction in HMBC and HMQC modules. |
format | Online Article Text |
id | pubmed-9082496 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-90824962022-05-10 Modular Pulse Program Generation for NMR Supersequences Yong, Jonathan R. J. Kupče, E̅riks Claridge, Tim D. W. Anal Chem [Image: see text] NMR supersequences allow multiple 2D NMR data sets to be acquired in greatly reduced experiment durations through tailored detection of NMR responses within concatenated modules. In NOAH (NMR by Ordered Acquisition using (1)H detection) experiments, up to five modules can be combined (or even more when parallel modules are employed), which in theory leads to thousands of plausible supersequences. However, constructing a pulse program for a supersequence is highly time-consuming, requires specialized knowledge, and is error-prone due to its complexity; this has prevented the true potential of the NOAH concept from being fully realized. We introduce here an online tool named GENESIS (GENEration of Supersequences In Silico), available via https://nmr-genesis.co.uk, which systematically generates pulse programs for arbitrary NOAH supersequences compatible with Bruker spectrometers. The GENESIS website provides a unified “one-stop” interface where users may obtain customized supersequences for specific applications, together with all associated acquisition and processing scripts, as well as detailed instructions for running NOAH experiments. Furthermore, it enables the rapid dissemination of new developments in NOAH sequences, such as new modules or improvements to existing modules. Here, we present several such enhancements, including options for solvent suppression, new modules based on pure shift NMR, and improved artifact reduction in HMBC and HMQC modules. American Chemical Society 2022-01-20 2022-02-01 /pmc/articles/PMC9082496/ /pubmed/35050622 http://dx.doi.org/10.1021/acs.analchem.1c04964 Text en © 2022 American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Yong, Jonathan R. J. Kupče, E̅riks Claridge, Tim D. W. Modular Pulse Program Generation for NMR Supersequences |
title | Modular Pulse Program Generation for NMR Supersequences |
title_full | Modular Pulse Program Generation for NMR Supersequences |
title_fullStr | Modular Pulse Program Generation for NMR Supersequences |
title_full_unstemmed | Modular Pulse Program Generation for NMR Supersequences |
title_short | Modular Pulse Program Generation for NMR Supersequences |
title_sort | modular pulse program generation for nmr supersequences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9082496/ https://www.ncbi.nlm.nih.gov/pubmed/35050622 http://dx.doi.org/10.1021/acs.analchem.1c04964 |
work_keys_str_mv | AT yongjonathanrj modularpulseprogramgenerationfornmrsupersequences AT kupceeriks modularpulseprogramgenerationfornmrsupersequences AT claridgetimdw modularpulseprogramgenerationfornmrsupersequences |