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Lessons learnt when accounting for competing events in the external validation of time-to-event prognostic models
BACKGROUND: External validation of prognostic models is necessary to assess the accuracy and generalizability of the model to new patients. If models are validated in a setting in which competing events occur, these competing risks should be accounted for when comparing predicted risks to observed o...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9082803/ https://www.ncbi.nlm.nih.gov/pubmed/34919691 http://dx.doi.org/10.1093/ije/dyab256 |
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author | Ramspek, Chava L Teece, Lucy Snell, Kym I E Evans, Marie Riley, Richard D van Smeden, Maarten van Geloven, Nan van Diepen, Merel |
author_facet | Ramspek, Chava L Teece, Lucy Snell, Kym I E Evans, Marie Riley, Richard D van Smeden, Maarten van Geloven, Nan van Diepen, Merel |
author_sort | Ramspek, Chava L |
collection | PubMed |
description | BACKGROUND: External validation of prognostic models is necessary to assess the accuracy and generalizability of the model to new patients. If models are validated in a setting in which competing events occur, these competing risks should be accounted for when comparing predicted risks to observed outcomes. METHODS: We discuss existing measures of calibration and discrimination that incorporate competing events for time-to-event models. These methods are illustrated using a clinical-data example concerning the prediction of kidney failure in a population with advanced chronic kidney disease (CKD), using the guideline-recommended Kidney Failure Risk Equation (KFRE). The KFRE was developed using Cox regression in a diverse population of CKD patients and has been proposed for use in patients with advanced CKD in whom death is a frequent competing event. RESULTS: When validating the 5-year KFRE with methods that account for competing events, it becomes apparent that the 5-year KFRE considerably overestimates the real-world risk of kidney failure. The absolute overestimation was 10%age points on average and 29%age points in older high-risk patients. CONCLUSIONS: It is crucial that competing events are accounted for during external validation to provide a more reliable assessment the performance of a model in clinical settings in which competing risks occur. |
format | Online Article Text |
id | pubmed-9082803 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-90828032022-05-09 Lessons learnt when accounting for competing events in the external validation of time-to-event prognostic models Ramspek, Chava L Teece, Lucy Snell, Kym I E Evans, Marie Riley, Richard D van Smeden, Maarten van Geloven, Nan van Diepen, Merel Int J Epidemiol Methods BACKGROUND: External validation of prognostic models is necessary to assess the accuracy and generalizability of the model to new patients. If models are validated in a setting in which competing events occur, these competing risks should be accounted for when comparing predicted risks to observed outcomes. METHODS: We discuss existing measures of calibration and discrimination that incorporate competing events for time-to-event models. These methods are illustrated using a clinical-data example concerning the prediction of kidney failure in a population with advanced chronic kidney disease (CKD), using the guideline-recommended Kidney Failure Risk Equation (KFRE). The KFRE was developed using Cox regression in a diverse population of CKD patients and has been proposed for use in patients with advanced CKD in whom death is a frequent competing event. RESULTS: When validating the 5-year KFRE with methods that account for competing events, it becomes apparent that the 5-year KFRE considerably overestimates the real-world risk of kidney failure. The absolute overestimation was 10%age points on average and 29%age points in older high-risk patients. CONCLUSIONS: It is crucial that competing events are accounted for during external validation to provide a more reliable assessment the performance of a model in clinical settings in which competing risks occur. Oxford University Press 2021-12-17 /pmc/articles/PMC9082803/ /pubmed/34919691 http://dx.doi.org/10.1093/ije/dyab256 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of the International Epidemiological Association. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Methods Ramspek, Chava L Teece, Lucy Snell, Kym I E Evans, Marie Riley, Richard D van Smeden, Maarten van Geloven, Nan van Diepen, Merel Lessons learnt when accounting for competing events in the external validation of time-to-event prognostic models |
title | Lessons learnt when accounting for competing events in the external validation of time-to-event prognostic models |
title_full | Lessons learnt when accounting for competing events in the external validation of time-to-event prognostic models |
title_fullStr | Lessons learnt when accounting for competing events in the external validation of time-to-event prognostic models |
title_full_unstemmed | Lessons learnt when accounting for competing events in the external validation of time-to-event prognostic models |
title_short | Lessons learnt when accounting for competing events in the external validation of time-to-event prognostic models |
title_sort | lessons learnt when accounting for competing events in the external validation of time-to-event prognostic models |
topic | Methods |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9082803/ https://www.ncbi.nlm.nih.gov/pubmed/34919691 http://dx.doi.org/10.1093/ije/dyab256 |
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