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Screening of Prognostic Biomarkers for Stereotactic Body Radiation Therapy in Primary Liver Cancer

OBJECTIVE: So far there are still no effective immediate-early markers for assessing the efficacy of Stereotactic Body Radiation Therapy (SBRT). To find effective biomarkers for accurate assessment of the efficacy of SBRT in patients with primary liver cancer, we conducted this study including retro...

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Autores principales: Liang, Zhenzhen, Xue, Chang, Chen, Qing, Li, Mengke, Li, Guanghui, Feng, Hao, Liu, Yi, Liu, Xiaodong, Ma, Shumei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9083052/
https://www.ncbi.nlm.nih.gov/pubmed/35547468
http://dx.doi.org/10.1177/15593258221097589
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author Liang, Zhenzhen
Xue, Chang
Chen, Qing
Li, Mengke
Li, Guanghui
Feng, Hao
Liu, Yi
Liu, Xiaodong
Ma, Shumei
author_facet Liang, Zhenzhen
Xue, Chang
Chen, Qing
Li, Mengke
Li, Guanghui
Feng, Hao
Liu, Yi
Liu, Xiaodong
Ma, Shumei
author_sort Liang, Zhenzhen
collection PubMed
description OBJECTIVE: So far there are still no effective immediate-early markers for assessing the efficacy of Stereotactic Body Radiation Therapy (SBRT). To find effective biomarkers for accurate assessment of the efficacy of SBRT in patients with primary liver cancer, we conducted this study including retrospective part and prospective part. MATERIAL AND METHODS: 589 patients with primary liver cancer were included at Ruikang Hospital affiliated to Guangxi Medical University from January 2012 to December 2018. Follow-up was conducted, clinical information and a total of 17 patients with 51 blood samples (before SBRT, before discharge and 2 months after SBRT) were collected. mRNAs profiles on 2 patients with 6 blood samples were detected by high-throughput sequencing, followed by qPCR verification on 15 patients with 45 blood samples. RESULTS: The commonly used serum biomarkers such as AFP, CEA, and CA125 shown low prognostic value in distinguishing survival group and death group, indicated by low AUC (less than .7) and Youden indexes (less than .5). Based on high-throughput sequencing of test group and qPCR detection of another verification group, we found 16 up-regulated and 12 downregulated genes after SBRT. Among them, ADIPOR1 and EPB42 showed significantly different between effective and ineffective group after SBRT, ROC suggested that based on the optimal threshold of .5838, ADIPOR1 shown a sensitivity of 100% and a specificity of 83.33% to distinguish effective from ineffective group. And EPB42 had a sensitivity of 75% and a specificity of 100% at the optimal threshold of 1.3817. In addition, GSEA showed that high expression of ADIPOR1 was mainly related to Mismatch repair, Circadian rhythm, Protein processing in endoplasmic reticulum, DNA replication, and Fanconi anemia pathways. CONCLUSION: ADIPOR1 in whole blood is a promising candidate to act as prognostic biomarker for predication of SBRT outcomes in primary liver cancer patients.
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spelling pubmed-90830522022-05-10 Screening of Prognostic Biomarkers for Stereotactic Body Radiation Therapy in Primary Liver Cancer Liang, Zhenzhen Xue, Chang Chen, Qing Li, Mengke Li, Guanghui Feng, Hao Liu, Yi Liu, Xiaodong Ma, Shumei Dose Response Original Article OBJECTIVE: So far there are still no effective immediate-early markers for assessing the efficacy of Stereotactic Body Radiation Therapy (SBRT). To find effective biomarkers for accurate assessment of the efficacy of SBRT in patients with primary liver cancer, we conducted this study including retrospective part and prospective part. MATERIAL AND METHODS: 589 patients with primary liver cancer were included at Ruikang Hospital affiliated to Guangxi Medical University from January 2012 to December 2018. Follow-up was conducted, clinical information and a total of 17 patients with 51 blood samples (before SBRT, before discharge and 2 months after SBRT) were collected. mRNAs profiles on 2 patients with 6 blood samples were detected by high-throughput sequencing, followed by qPCR verification on 15 patients with 45 blood samples. RESULTS: The commonly used serum biomarkers such as AFP, CEA, and CA125 shown low prognostic value in distinguishing survival group and death group, indicated by low AUC (less than .7) and Youden indexes (less than .5). Based on high-throughput sequencing of test group and qPCR detection of another verification group, we found 16 up-regulated and 12 downregulated genes after SBRT. Among them, ADIPOR1 and EPB42 showed significantly different between effective and ineffective group after SBRT, ROC suggested that based on the optimal threshold of .5838, ADIPOR1 shown a sensitivity of 100% and a specificity of 83.33% to distinguish effective from ineffective group. And EPB42 had a sensitivity of 75% and a specificity of 100% at the optimal threshold of 1.3817. In addition, GSEA showed that high expression of ADIPOR1 was mainly related to Mismatch repair, Circadian rhythm, Protein processing in endoplasmic reticulum, DNA replication, and Fanconi anemia pathways. CONCLUSION: ADIPOR1 in whole blood is a promising candidate to act as prognostic biomarker for predication of SBRT outcomes in primary liver cancer patients. SAGE Publications 2022-05-06 /pmc/articles/PMC9083052/ /pubmed/35547468 http://dx.doi.org/10.1177/15593258221097589 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Original Article
Liang, Zhenzhen
Xue, Chang
Chen, Qing
Li, Mengke
Li, Guanghui
Feng, Hao
Liu, Yi
Liu, Xiaodong
Ma, Shumei
Screening of Prognostic Biomarkers for Stereotactic Body Radiation Therapy in Primary Liver Cancer
title Screening of Prognostic Biomarkers for Stereotactic Body Radiation Therapy in Primary Liver Cancer
title_full Screening of Prognostic Biomarkers for Stereotactic Body Radiation Therapy in Primary Liver Cancer
title_fullStr Screening of Prognostic Biomarkers for Stereotactic Body Radiation Therapy in Primary Liver Cancer
title_full_unstemmed Screening of Prognostic Biomarkers for Stereotactic Body Radiation Therapy in Primary Liver Cancer
title_short Screening of Prognostic Biomarkers for Stereotactic Body Radiation Therapy in Primary Liver Cancer
title_sort screening of prognostic biomarkers for stereotactic body radiation therapy in primary liver cancer
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9083052/
https://www.ncbi.nlm.nih.gov/pubmed/35547468
http://dx.doi.org/10.1177/15593258221097589
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