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Pharmacogenetic distinction of the Croatian population from the European average

AIM: To compare the Croatian and European population in terms of allele frequencies of clinically relevant polymorphisms in drug absorption, distribution, metabolism, and excretion (ADME) genes. METHODS: In 429 Croatian participants, we genotyped 27 loci in 20 ADME genes. The obtained frequencies we...

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Autores principales: Celinšćak, Željka, Zajc-Petranović, Matea, Šetinc, Maja, Stojanović Marković, Anita, Peričić Salihović, Marijana, Zeljko, Hrvojka Marija, Janićijević, Branka, Smolej Narančić, Nina, Škarić-Jurić, Tatjana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Croatian Medical Schools 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9086818/
https://www.ncbi.nlm.nih.gov/pubmed/35505645
http://dx.doi.org/10.3325/cmj.2022.63.117
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author Celinšćak, Željka
Zajc-Petranović, Matea
Šetinc, Maja
Stojanović Marković, Anita
Peričić Salihović, Marijana
Zeljko, Hrvojka Marija
Janićijević, Branka
Smolej Narančić, Nina
Škarić-Jurić, Tatjana
author_facet Celinšćak, Željka
Zajc-Petranović, Matea
Šetinc, Maja
Stojanović Marković, Anita
Peričić Salihović, Marijana
Zeljko, Hrvojka Marija
Janićijević, Branka
Smolej Narančić, Nina
Škarić-Jurić, Tatjana
author_sort Celinšćak, Željka
collection PubMed
description AIM: To compare the Croatian and European population in terms of allele frequencies of clinically relevant polymorphisms in drug absorption, distribution, metabolism, and excretion (ADME) genes. METHODS: In 429 Croatian participants, we genotyped 27 loci in 20 ADME genes. The obtained frequencies were merged with the published frequencies for the Croatian population by sample size weighting. The study sample obtained in this way was compared with the average data for the European population from the gnomAD database. RESULTS: Variant allele frequencies in the Croatian population were higher in three and lower in two polymorphisms (Benjamini-Hochberg-corrected P values: 0.0027 for CYP2B6*4 rs2279343, CYP2C9*2 rs1799853, and VKORC1 rs9923231; 0.0297 for GSTP1 rs1695; 0.0455 for CYP2A6 rs1801272) compared with the European population. The most marked difference was observed for CYP2B6*4 (9.3% in Europe vs 24.3% in Croatia). The most clinically relevant findings were higher variant allele frequencies in two polymorphisms related to lower warfarin requirements: VKORC1*2 (34.9% in Europe vs 40.1% in Croatia) and CYP2C9*2 (12.3% in Europe vs 14.7% in Croatia). This indicates that three-quarters of Croatian people have at least one variant allele at these loci. Variants in genes GSTP1 and CYP2A6 were significantly less frequently observed in Croatia. CONCLUSIONS: Croatian population has a higher bleeding and over-anticoagulation risk, which is why we recommend the prescription of lower doses of anticoagulation drugs such as warfarin and acenocoumarol. Lower phenytoin, and higher bupropion and efavirenz doses are also recommended in the Croatian population.
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spelling pubmed-90868182022-05-24 Pharmacogenetic distinction of the Croatian population from the European average Celinšćak, Željka Zajc-Petranović, Matea Šetinc, Maja Stojanović Marković, Anita Peričić Salihović, Marijana Zeljko, Hrvojka Marija Janićijević, Branka Smolej Narančić, Nina Škarić-Jurić, Tatjana Croat Med J Research Article AIM: To compare the Croatian and European population in terms of allele frequencies of clinically relevant polymorphisms in drug absorption, distribution, metabolism, and excretion (ADME) genes. METHODS: In 429 Croatian participants, we genotyped 27 loci in 20 ADME genes. The obtained frequencies were merged with the published frequencies for the Croatian population by sample size weighting. The study sample obtained in this way was compared with the average data for the European population from the gnomAD database. RESULTS: Variant allele frequencies in the Croatian population were higher in three and lower in two polymorphisms (Benjamini-Hochberg-corrected P values: 0.0027 for CYP2B6*4 rs2279343, CYP2C9*2 rs1799853, and VKORC1 rs9923231; 0.0297 for GSTP1 rs1695; 0.0455 for CYP2A6 rs1801272) compared with the European population. The most marked difference was observed for CYP2B6*4 (9.3% in Europe vs 24.3% in Croatia). The most clinically relevant findings were higher variant allele frequencies in two polymorphisms related to lower warfarin requirements: VKORC1*2 (34.9% in Europe vs 40.1% in Croatia) and CYP2C9*2 (12.3% in Europe vs 14.7% in Croatia). This indicates that three-quarters of Croatian people have at least one variant allele at these loci. Variants in genes GSTP1 and CYP2A6 were significantly less frequently observed in Croatia. CONCLUSIONS: Croatian population has a higher bleeding and over-anticoagulation risk, which is why we recommend the prescription of lower doses of anticoagulation drugs such as warfarin and acenocoumarol. Lower phenytoin, and higher bupropion and efavirenz doses are also recommended in the Croatian population. Croatian Medical Schools 2022-04 /pmc/articles/PMC9086818/ /pubmed/35505645 http://dx.doi.org/10.3325/cmj.2022.63.117 Text en Copyright © 2022 by the Croatian Medical Journal. All rights reserved. https://creativecommons.org/licenses/by/2.5/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Celinšćak, Željka
Zajc-Petranović, Matea
Šetinc, Maja
Stojanović Marković, Anita
Peričić Salihović, Marijana
Zeljko, Hrvojka Marija
Janićijević, Branka
Smolej Narančić, Nina
Škarić-Jurić, Tatjana
Pharmacogenetic distinction of the Croatian population from the European average
title Pharmacogenetic distinction of the Croatian population from the European average
title_full Pharmacogenetic distinction of the Croatian population from the European average
title_fullStr Pharmacogenetic distinction of the Croatian population from the European average
title_full_unstemmed Pharmacogenetic distinction of the Croatian population from the European average
title_short Pharmacogenetic distinction of the Croatian population from the European average
title_sort pharmacogenetic distinction of the croatian population from the european average
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9086818/
https://www.ncbi.nlm.nih.gov/pubmed/35505645
http://dx.doi.org/10.3325/cmj.2022.63.117
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