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Development of a portable electrochemical loop mediated isothermal amplification (LAMP) device for detection of hepatitis B virus

The objective of this study was to develop a simple, inexpensive prototype device for rapid detection of hepatitis B virus (HBV). The device was able to simultaneously amplify, detect and quantify the target HBV DNA. The system was fabricated from a custom-made electrochemical set-up of which the te...

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Autores principales: Jayanath, Nileththi Yasendra, Nguyen, Loc Thai, Vu, Thu Thi, Tran, Lam Dai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9087361/
https://www.ncbi.nlm.nih.gov/pubmed/35547082
http://dx.doi.org/10.1039/c8ra07235c
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author Jayanath, Nileththi Yasendra
Nguyen, Loc Thai
Vu, Thu Thi
Tran, Lam Dai
author_facet Jayanath, Nileththi Yasendra
Nguyen, Loc Thai
Vu, Thu Thi
Tran, Lam Dai
author_sort Jayanath, Nileththi Yasendra
collection PubMed
description The objective of this study was to develop a simple, inexpensive prototype device for rapid detection of hepatitis B virus (HBV). The device was able to simultaneously amplify, detect and quantify the target HBV DNA. The system was fabricated from a custom-made electrochemical set-up of which the temperature was thermostatically controlled by a water bath. Real-time monitoring of HBV DNA was accomplished by measuring the response of redox indicator in the reaction mixture. Concentration of HBV DNA in the samples was determined from the peak high ratio (PHR) and threshold time relationship. The signal was processed by sigmoidal model fitting to enhance the accuracy of the results. Key parameters including concentrations of redox indicator and reaction temperatures were optimized. Sensitivity and specificity of the method toward HBV DNA were evaluated. The prototype was capable of real-time amplification and detection of HBV DNA with concentration as low as 6.18 fg μl(−1). The test showed high specificity against HBV DNA. The system was also able to detect HBV positive serum directly with simple thermal pretreatment instead of tedious DNA extraction. The electrochemical set-up was compatible with microfluidic platforms and can be readily adapted for efficient and high throughput point-of-care (POC) diagnosis of HBV.
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spelling pubmed-90873612022-05-10 Development of a portable electrochemical loop mediated isothermal amplification (LAMP) device for detection of hepatitis B virus Jayanath, Nileththi Yasendra Nguyen, Loc Thai Vu, Thu Thi Tran, Lam Dai RSC Adv Chemistry The objective of this study was to develop a simple, inexpensive prototype device for rapid detection of hepatitis B virus (HBV). The device was able to simultaneously amplify, detect and quantify the target HBV DNA. The system was fabricated from a custom-made electrochemical set-up of which the temperature was thermostatically controlled by a water bath. Real-time monitoring of HBV DNA was accomplished by measuring the response of redox indicator in the reaction mixture. Concentration of HBV DNA in the samples was determined from the peak high ratio (PHR) and threshold time relationship. The signal was processed by sigmoidal model fitting to enhance the accuracy of the results. Key parameters including concentrations of redox indicator and reaction temperatures were optimized. Sensitivity and specificity of the method toward HBV DNA were evaluated. The prototype was capable of real-time amplification and detection of HBV DNA with concentration as low as 6.18 fg μl(−1). The test showed high specificity against HBV DNA. The system was also able to detect HBV positive serum directly with simple thermal pretreatment instead of tedious DNA extraction. The electrochemical set-up was compatible with microfluidic platforms and can be readily adapted for efficient and high throughput point-of-care (POC) diagnosis of HBV. The Royal Society of Chemistry 2018-10-12 /pmc/articles/PMC9087361/ /pubmed/35547082 http://dx.doi.org/10.1039/c8ra07235c Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Jayanath, Nileththi Yasendra
Nguyen, Loc Thai
Vu, Thu Thi
Tran, Lam Dai
Development of a portable electrochemical loop mediated isothermal amplification (LAMP) device for detection of hepatitis B virus
title Development of a portable electrochemical loop mediated isothermal amplification (LAMP) device for detection of hepatitis B virus
title_full Development of a portable electrochemical loop mediated isothermal amplification (LAMP) device for detection of hepatitis B virus
title_fullStr Development of a portable electrochemical loop mediated isothermal amplification (LAMP) device for detection of hepatitis B virus
title_full_unstemmed Development of a portable electrochemical loop mediated isothermal amplification (LAMP) device for detection of hepatitis B virus
title_short Development of a portable electrochemical loop mediated isothermal amplification (LAMP) device for detection of hepatitis B virus
title_sort development of a portable electrochemical loop mediated isothermal amplification (lamp) device for detection of hepatitis b virus
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9087361/
https://www.ncbi.nlm.nih.gov/pubmed/35547082
http://dx.doi.org/10.1039/c8ra07235c
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