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Cotton Yield Estimation From Aerial Imagery Using Machine Learning Approaches

Estimation of cotton yield before harvest offers many benefits to breeding programs, researchers and producers. Remote sensing enables efficient and consistent estimation of cotton yields, as opposed to traditional field measurements and surveys. The overall goal of this study was to develop a data...

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Autores principales: Rodriguez-Sanchez, Javier, Li, Changying, Paterson, Andrew H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9087849/
https://www.ncbi.nlm.nih.gov/pubmed/35557717
http://dx.doi.org/10.3389/fpls.2022.870181
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author Rodriguez-Sanchez, Javier
Li, Changying
Paterson, Andrew H.
author_facet Rodriguez-Sanchez, Javier
Li, Changying
Paterson, Andrew H.
author_sort Rodriguez-Sanchez, Javier
collection PubMed
description Estimation of cotton yield before harvest offers many benefits to breeding programs, researchers and producers. Remote sensing enables efficient and consistent estimation of cotton yields, as opposed to traditional field measurements and surveys. The overall goal of this study was to develop a data processing pipeline to perform fast and accurate pre-harvest yield predictions of cotton breeding fields from aerial imagery using machine learning techniques. By using only a single plot image extracted from an orthomosaic map, a Support Vector Machine (SVM) classifier with four selected features was trained to identify the cotton pixels present in each plot image. The SVM classifier achieved an accuracy of 89%, a precision of 86%, a recall of 75%, and an F1-score of 80% at recognizing cotton pixels. After performing morphological image processing operations and applying a connected components algorithm, the classified cotton pixels were clustered to predict the number of cotton bolls at the plot level. Our model fitted the ground truth counts with an R(2) value of 0.93, a normalized root mean squared error of 0.07, and a mean absolute percentage error of 13.7%. This study demonstrates that aerial imagery with machine learning techniques can be a reliable, efficient, and effective tool for pre-harvest cotton yield prediction.
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spelling pubmed-90878492022-05-11 Cotton Yield Estimation From Aerial Imagery Using Machine Learning Approaches Rodriguez-Sanchez, Javier Li, Changying Paterson, Andrew H. Front Plant Sci Plant Science Estimation of cotton yield before harvest offers many benefits to breeding programs, researchers and producers. Remote sensing enables efficient and consistent estimation of cotton yields, as opposed to traditional field measurements and surveys. The overall goal of this study was to develop a data processing pipeline to perform fast and accurate pre-harvest yield predictions of cotton breeding fields from aerial imagery using machine learning techniques. By using only a single plot image extracted from an orthomosaic map, a Support Vector Machine (SVM) classifier with four selected features was trained to identify the cotton pixels present in each plot image. The SVM classifier achieved an accuracy of 89%, a precision of 86%, a recall of 75%, and an F1-score of 80% at recognizing cotton pixels. After performing morphological image processing operations and applying a connected components algorithm, the classified cotton pixels were clustered to predict the number of cotton bolls at the plot level. Our model fitted the ground truth counts with an R(2) value of 0.93, a normalized root mean squared error of 0.07, and a mean absolute percentage error of 13.7%. This study demonstrates that aerial imagery with machine learning techniques can be a reliable, efficient, and effective tool for pre-harvest cotton yield prediction. Frontiers Media S.A. 2022-04-26 /pmc/articles/PMC9087849/ /pubmed/35557717 http://dx.doi.org/10.3389/fpls.2022.870181 Text en Copyright © 2022 Rodriguez-Sanchez, Li and Paterson. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Rodriguez-Sanchez, Javier
Li, Changying
Paterson, Andrew H.
Cotton Yield Estimation From Aerial Imagery Using Machine Learning Approaches
title Cotton Yield Estimation From Aerial Imagery Using Machine Learning Approaches
title_full Cotton Yield Estimation From Aerial Imagery Using Machine Learning Approaches
title_fullStr Cotton Yield Estimation From Aerial Imagery Using Machine Learning Approaches
title_full_unstemmed Cotton Yield Estimation From Aerial Imagery Using Machine Learning Approaches
title_short Cotton Yield Estimation From Aerial Imagery Using Machine Learning Approaches
title_sort cotton yield estimation from aerial imagery using machine learning approaches
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9087849/
https://www.ncbi.nlm.nih.gov/pubmed/35557717
http://dx.doi.org/10.3389/fpls.2022.870181
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