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Low-Barrier Hydrogen Bond in Fujikurin A–D: A Computational Study

[Image: see text] The compounds Fujikurin A, B, and D, recently isolated from Fusarium fujikuroi, possess intramolecular low-barrier hydrogen bonds (LBHBs), which are hydrogen bonds with a very low-energy barrier for proton transfer. The isolated compounds have a hydrogen-bonded proton that appears...

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Autores principales: Tanaka, Hikaru, Kuwahata, Kazuaki, Tachikawa, Masanori, Udagawa, Taro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9089377/
https://www.ncbi.nlm.nih.gov/pubmed/35559150
http://dx.doi.org/10.1021/acsomega.2c00857
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author Tanaka, Hikaru
Kuwahata, Kazuaki
Tachikawa, Masanori
Udagawa, Taro
author_facet Tanaka, Hikaru
Kuwahata, Kazuaki
Tachikawa, Masanori
Udagawa, Taro
author_sort Tanaka, Hikaru
collection PubMed
description [Image: see text] The compounds Fujikurin A, B, and D, recently isolated from Fusarium fujikuroi, possess intramolecular low-barrier hydrogen bonds (LBHBs), which are hydrogen bonds with a very low-energy barrier for proton transfer. The isolated compounds have a hydrogen-bonded proton that appears to rapidly switch between two equilibrium states via a transition state (TS). To understand the characteristics of these intramolecular LBHBs in detail, we performed path integral molecular dynamics (PIMD) simulations, which can consider nuclear quantum effects (NQEs) under a finite temperature. The PIMD simulations predicted that the NQE completely washed out the energy barrier for the proton transfer reaction. Consequently, a single-well shape emerged in the results, along with the effective free-energy potential surface for the hydrogen-bonded proton distribution. Thus, we conclude that the hydrogen-bonded proton in Fujikurin does not in fact transfer between two equilibrium structures but widely delocalizes around the global minimum structure involving the TS region.
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spelling pubmed-90893772022-05-11 Low-Barrier Hydrogen Bond in Fujikurin A–D: A Computational Study Tanaka, Hikaru Kuwahata, Kazuaki Tachikawa, Masanori Udagawa, Taro ACS Omega [Image: see text] The compounds Fujikurin A, B, and D, recently isolated from Fusarium fujikuroi, possess intramolecular low-barrier hydrogen bonds (LBHBs), which are hydrogen bonds with a very low-energy barrier for proton transfer. The isolated compounds have a hydrogen-bonded proton that appears to rapidly switch between two equilibrium states via a transition state (TS). To understand the characteristics of these intramolecular LBHBs in detail, we performed path integral molecular dynamics (PIMD) simulations, which can consider nuclear quantum effects (NQEs) under a finite temperature. The PIMD simulations predicted that the NQE completely washed out the energy barrier for the proton transfer reaction. Consequently, a single-well shape emerged in the results, along with the effective free-energy potential surface for the hydrogen-bonded proton distribution. Thus, we conclude that the hydrogen-bonded proton in Fujikurin does not in fact transfer between two equilibrium structures but widely delocalizes around the global minimum structure involving the TS region. American Chemical Society 2022-04-15 /pmc/articles/PMC9089377/ /pubmed/35559150 http://dx.doi.org/10.1021/acsomega.2c00857 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Tanaka, Hikaru
Kuwahata, Kazuaki
Tachikawa, Masanori
Udagawa, Taro
Low-Barrier Hydrogen Bond in Fujikurin A–D: A Computational Study
title Low-Barrier Hydrogen Bond in Fujikurin A–D: A Computational Study
title_full Low-Barrier Hydrogen Bond in Fujikurin A–D: A Computational Study
title_fullStr Low-Barrier Hydrogen Bond in Fujikurin A–D: A Computational Study
title_full_unstemmed Low-Barrier Hydrogen Bond in Fujikurin A–D: A Computational Study
title_short Low-Barrier Hydrogen Bond in Fujikurin A–D: A Computational Study
title_sort low-barrier hydrogen bond in fujikurin a–d: a computational study
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9089377/
https://www.ncbi.nlm.nih.gov/pubmed/35559150
http://dx.doi.org/10.1021/acsomega.2c00857
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