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Complete plastome sequence from a cultivar of Diospyros nigra (J.F.Gmel.) M.R. Almeida (Ebenaceae): a nutritious fruit tree with high economic value cultivated in Hainan province, China

Diospyros nigra (J.F.Gmel.) M.R.Almeida is a rare tree in the family Ebenaceae. The species is native to South America, while having been introduced to Florida and Texas (USA), India, Java and Madagascar. Additionally, this species is distributed in Guangdong Province and the southwest portion of Ha...

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Autores principales: Xin-Xin, Xu, Wang, Hong-Xin, Chen, Da-Juan, Ke, Xiu-Rong, Zhu, Zhi-Xin, Wang, Hua-Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9090366/
https://www.ncbi.nlm.nih.gov/pubmed/35558176
http://dx.doi.org/10.1080/23802359.2022.2072243
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author Xin-Xin, Xu
Wang, Hong-Xin
Chen, Da-Juan
Ke, Xiu-Rong
Zhu, Zhi-Xin
Wang, Hua-Feng
author_facet Xin-Xin, Xu
Wang, Hong-Xin
Chen, Da-Juan
Ke, Xiu-Rong
Zhu, Zhi-Xin
Wang, Hua-Feng
author_sort Xin-Xin, Xu
collection PubMed
description Diospyros nigra (J.F.Gmel.) M.R.Almeida is a rare tree in the family Ebenaceae. The species is native to South America, while having been introduced to Florida and Texas (USA), India, Java and Madagascar. Additionally, this species is distributed in Guangdong Province and the southwest portion of Hainan Province, China. Here, we report and characterize the complete plastome of a cultivar of D. nigra. The length of the complete plastome is 157,168 bp, including 131 genes consisting of 84 protein-coding genes, 37 tRNA genes and 8 rRNA genes. The plastome has the typical structure and gene content of angiosperms, including two inverted repeat (IR) regions of 26,095 bp, a large single copy (LSC) region of 86,610 bp and a small single-copy (SSC) region of 18,386 bp. The total G/C content of the plastome in D. nigra is 37.4%. The complete plastome sequence of D. nigra will make contributions to the conservation genetics of the species, as well as to phylogenetic studies in Ebenaceae.
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spelling pubmed-90903662022-05-11 Complete plastome sequence from a cultivar of Diospyros nigra (J.F.Gmel.) M.R. Almeida (Ebenaceae): a nutritious fruit tree with high economic value cultivated in Hainan province, China Xin-Xin, Xu Wang, Hong-Xin Chen, Da-Juan Ke, Xiu-Rong Zhu, Zhi-Xin Wang, Hua-Feng Mitochondrial DNA B Resour Plastome Announcement Diospyros nigra (J.F.Gmel.) M.R.Almeida is a rare tree in the family Ebenaceae. The species is native to South America, while having been introduced to Florida and Texas (USA), India, Java and Madagascar. Additionally, this species is distributed in Guangdong Province and the southwest portion of Hainan Province, China. Here, we report and characterize the complete plastome of a cultivar of D. nigra. The length of the complete plastome is 157,168 bp, including 131 genes consisting of 84 protein-coding genes, 37 tRNA genes and 8 rRNA genes. The plastome has the typical structure and gene content of angiosperms, including two inverted repeat (IR) regions of 26,095 bp, a large single copy (LSC) region of 86,610 bp and a small single-copy (SSC) region of 18,386 bp. The total G/C content of the plastome in D. nigra is 37.4%. The complete plastome sequence of D. nigra will make contributions to the conservation genetics of the species, as well as to phylogenetic studies in Ebenaceae. Taylor & Francis 2022-05-09 /pmc/articles/PMC9090366/ /pubmed/35558176 http://dx.doi.org/10.1080/23802359.2022.2072243 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Xin-Xin, Xu
Wang, Hong-Xin
Chen, Da-Juan
Ke, Xiu-Rong
Zhu, Zhi-Xin
Wang, Hua-Feng
Complete plastome sequence from a cultivar of Diospyros nigra (J.F.Gmel.) M.R. Almeida (Ebenaceae): a nutritious fruit tree with high economic value cultivated in Hainan province, China
title Complete plastome sequence from a cultivar of Diospyros nigra (J.F.Gmel.) M.R. Almeida (Ebenaceae): a nutritious fruit tree with high economic value cultivated in Hainan province, China
title_full Complete plastome sequence from a cultivar of Diospyros nigra (J.F.Gmel.) M.R. Almeida (Ebenaceae): a nutritious fruit tree with high economic value cultivated in Hainan province, China
title_fullStr Complete plastome sequence from a cultivar of Diospyros nigra (J.F.Gmel.) M.R. Almeida (Ebenaceae): a nutritious fruit tree with high economic value cultivated in Hainan province, China
title_full_unstemmed Complete plastome sequence from a cultivar of Diospyros nigra (J.F.Gmel.) M.R. Almeida (Ebenaceae): a nutritious fruit tree with high economic value cultivated in Hainan province, China
title_short Complete plastome sequence from a cultivar of Diospyros nigra (J.F.Gmel.) M.R. Almeida (Ebenaceae): a nutritious fruit tree with high economic value cultivated in Hainan province, China
title_sort complete plastome sequence from a cultivar of diospyros nigra (j.f.gmel.) m.r. almeida (ebenaceae): a nutritious fruit tree with high economic value cultivated in hainan province, china
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9090366/
https://www.ncbi.nlm.nih.gov/pubmed/35558176
http://dx.doi.org/10.1080/23802359.2022.2072243
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