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Complete chloroplast genome sequence and annotation of Machilus salicina Hance, 1885 (lauraceae)

Machilus salicina Hance, 1885 is a species of flowering plant in the family Lauraceae and is mainly found at low altitudes in southern China. In this study, we assembled and annotated the complete chloroplast genome of M. salicina for the first time. We analyzed the general features of M. salicina a...

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Autores principales: Xiaoxuan, Long, Shi, Wenbo, Song, Weicai, Han, Weiqi, Yang, Guiwen, Wang, Shuo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9090370/
https://www.ncbi.nlm.nih.gov/pubmed/35558181
http://dx.doi.org/10.1080/23802359.2022.2068981
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author Xiaoxuan, Long
Shi, Wenbo
Song, Weicai
Han, Weiqi
Yang, Guiwen
Wang, Shuo
author_facet Xiaoxuan, Long
Shi, Wenbo
Song, Weicai
Han, Weiqi
Yang, Guiwen
Wang, Shuo
author_sort Xiaoxuan, Long
collection PubMed
description Machilus salicina Hance, 1885 is a species of flowering plant in the family Lauraceae and is mainly found at low altitudes in southern China. In this study, we assembled and annotated the complete chloroplast genome of M. salicina for the first time. We analyzed the general features of M. salicina and constructed a phylogenetic tree based on 15 Lauraceae species. The chloroplast genome of M. salicina had a total length of 153,943 bp. The length of a large single copy region, a small single copy region, and two inverted repeat regions were 93,689 bp, 20,070 bp, and 20,092bp, respectively. A total of 128 genes were detected, which included 84 protein-coding genes, 36 tRNAs and 8 rRNAs. The GC content of M. salicina complete chloroplast genome was 39.1%. The phylogenetic tree indicated that M. salicina was closely related to M. yunnanensis.
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spelling pubmed-90903702022-05-11 Complete chloroplast genome sequence and annotation of Machilus salicina Hance, 1885 (lauraceae) Xiaoxuan, Long Shi, Wenbo Song, Weicai Han, Weiqi Yang, Guiwen Wang, Shuo Mitochondrial DNA B Resour Plastome Announcement Machilus salicina Hance, 1885 is a species of flowering plant in the family Lauraceae and is mainly found at low altitudes in southern China. In this study, we assembled and annotated the complete chloroplast genome of M. salicina for the first time. We analyzed the general features of M. salicina and constructed a phylogenetic tree based on 15 Lauraceae species. The chloroplast genome of M. salicina had a total length of 153,943 bp. The length of a large single copy region, a small single copy region, and two inverted repeat regions were 93,689 bp, 20,070 bp, and 20,092bp, respectively. A total of 128 genes were detected, which included 84 protein-coding genes, 36 tRNAs and 8 rRNAs. The GC content of M. salicina complete chloroplast genome was 39.1%. The phylogenetic tree indicated that M. salicina was closely related to M. yunnanensis. Taylor & Francis 2022-05-04 /pmc/articles/PMC9090370/ /pubmed/35558181 http://dx.doi.org/10.1080/23802359.2022.2068981 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Xiaoxuan, Long
Shi, Wenbo
Song, Weicai
Han, Weiqi
Yang, Guiwen
Wang, Shuo
Complete chloroplast genome sequence and annotation of Machilus salicina Hance, 1885 (lauraceae)
title Complete chloroplast genome sequence and annotation of Machilus salicina Hance, 1885 (lauraceae)
title_full Complete chloroplast genome sequence and annotation of Machilus salicina Hance, 1885 (lauraceae)
title_fullStr Complete chloroplast genome sequence and annotation of Machilus salicina Hance, 1885 (lauraceae)
title_full_unstemmed Complete chloroplast genome sequence and annotation of Machilus salicina Hance, 1885 (lauraceae)
title_short Complete chloroplast genome sequence and annotation of Machilus salicina Hance, 1885 (lauraceae)
title_sort complete chloroplast genome sequence and annotation of machilus salicina hance, 1885 (lauraceae)
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9090370/
https://www.ncbi.nlm.nih.gov/pubmed/35558181
http://dx.doi.org/10.1080/23802359.2022.2068981
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