The complete plastid genome sequence of Peucedanum hakuunense Nakai (Apiaceae), an endemic and rare species in Korea

Peucedanum hakuunense Nakai is one of the rare species in the Korean Peninsula. This study characterized the complete plastid genome (plastome) sequence of P. hakuunense by de novo assembly with next-generation sequencing data. The complete plastome of P. hakuunense is 147,426 bp in length with a ty...

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Autores principales: Joh, Ho Jun, Park, Hyun-Seung, Kang, Jong-Soo, Park, Jee Young, Yang, Tae-Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9090427/
https://www.ncbi.nlm.nih.gov/pubmed/35558174
http://dx.doi.org/10.1080/23802359.2022.2069522
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author Joh, Ho Jun
Park, Hyun-Seung
Kang, Jong-Soo
Park, Jee Young
Yang, Tae-Jin
author_facet Joh, Ho Jun
Park, Hyun-Seung
Kang, Jong-Soo
Park, Jee Young
Yang, Tae-Jin
author_sort Joh, Ho Jun
collection PubMed
description Peucedanum hakuunense Nakai is one of the rare species in the Korean Peninsula. This study characterized the complete plastid genome (plastome) sequence of P. hakuunense by de novo assembly with next-generation sequencing data. The complete plastome of P. hakuunense is 147,426 bp in length with a typical quadripartite structure comprising a large single-copy region of 91,915 bp, a small single-copy region of 17,425 bp, and two inverted repeat regions of 19,043 bp in length. The plastome of P. hakuunense is composed of 85 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The phylogenetic analysis revealed that two Peucedanum species formed an independent subclade, sister to the subclade of Angelica species within the tribe Selineae.
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spelling pubmed-90904272022-05-11 The complete plastid genome sequence of Peucedanum hakuunense Nakai (Apiaceae), an endemic and rare species in Korea Joh, Ho Jun Park, Hyun-Seung Kang, Jong-Soo Park, Jee Young Yang, Tae-Jin Mitochondrial DNA B Resour Mitogenome Announcement Peucedanum hakuunense Nakai is one of the rare species in the Korean Peninsula. This study characterized the complete plastid genome (plastome) sequence of P. hakuunense by de novo assembly with next-generation sequencing data. The complete plastome of P. hakuunense is 147,426 bp in length with a typical quadripartite structure comprising a large single-copy region of 91,915 bp, a small single-copy region of 17,425 bp, and two inverted repeat regions of 19,043 bp in length. The plastome of P. hakuunense is composed of 85 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The phylogenetic analysis revealed that two Peucedanum species formed an independent subclade, sister to the subclade of Angelica species within the tribe Selineae. Taylor & Francis 2022-05-05 /pmc/articles/PMC9090427/ /pubmed/35558174 http://dx.doi.org/10.1080/23802359.2022.2069522 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Joh, Ho Jun
Park, Hyun-Seung
Kang, Jong-Soo
Park, Jee Young
Yang, Tae-Jin
The complete plastid genome sequence of Peucedanum hakuunense Nakai (Apiaceae), an endemic and rare species in Korea
title The complete plastid genome sequence of Peucedanum hakuunense Nakai (Apiaceae), an endemic and rare species in Korea
title_full The complete plastid genome sequence of Peucedanum hakuunense Nakai (Apiaceae), an endemic and rare species in Korea
title_fullStr The complete plastid genome sequence of Peucedanum hakuunense Nakai (Apiaceae), an endemic and rare species in Korea
title_full_unstemmed The complete plastid genome sequence of Peucedanum hakuunense Nakai (Apiaceae), an endemic and rare species in Korea
title_short The complete plastid genome sequence of Peucedanum hakuunense Nakai (Apiaceae), an endemic and rare species in Korea
title_sort complete plastid genome sequence of peucedanum hakuunense nakai (apiaceae), an endemic and rare species in korea
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9090427/
https://www.ncbi.nlm.nih.gov/pubmed/35558174
http://dx.doi.org/10.1080/23802359.2022.2069522
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