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Faster SARS-CoV-2 sequence validation and annotation for GenBank using VADR

BACKGROUND: In 2020 and 2021, more than 1.5 million SARS-CoV-2 sequences were submitted to GenBank. The initial version (v1.0) of the VADR (Viral Annotation DefineR) software package that GenBank uses to automatically validate and annotate incoming viral sequences is too slow and memory intensive to...

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Detalles Bibliográficos
Autor principal: Nawrocki, Eric P
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9094095/
https://www.ncbi.nlm.nih.gov/pubmed/35547842
http://dx.doi.org/10.1101/2022.04.25.489427