Cargando…

Galbase: a comprehensive repository for integrating chicken multi-omics data

BACKGROUND: Multi-omics data can provide a stereoscopic view to explore potential causal variations and genes, as well as underlying genetic mechanisms of complex traits. However, for many non-mammalian species, including chickens, these resources are poorly integrated and reused, greatly limiting g...

Descripción completa

Detalles Bibliográficos
Autores principales:	Fu, Weiwei, Wang, Rui, Xu, Naiyi, Wang, Jinxin, Li, Ran, Asadollahpour Nanaei, Hojjat, Nie, Qinghua, Zhao, Xin, Han, Jianlin, Yang, Ning, Jiang, Yu
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2022
Materias:	Database
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9097087/ https://www.ncbi.nlm.nih.gov/pubmed/35549894 http://dx.doi.org/10.1186/s12864-022-08598-2

Ejemplares similares

RGD v2.0: a major update of the ruminant functional and evolutionary genomics database
por: Fu, Weiwei, et al.
Publicado: (2021)

Genetic diversity and signatures of selection for heat tolerance and immune response in Iranian native chickens
por: Asadollahpour Nanaei, Hojjat, et al.
Publicado: (2022)

Correction: Genetic diversity and signatures of selection for heat tolerance and immune response in Iranian native chickens
por: Nanaei, Hojjat Asadollahpour, et al.
Publicado: (2022)

BDdb: a comprehensive platform for exploration and utilization of birth defect multi-omics data
por: Zhang, Dengwei, et al.
Publicado: (2021)

DRAMP 3.0: an enhanced comprehensive data repository of antimicrobial peptides
por: Shi, Guobang, et al.
Publicado: (2021)

BGFD: an integrated multi-omics database of barley gene families
por: Li, Tingting, et al.
Publicado: (2022)

SmProt: A Reliable Repository with Comprehensive Annotation of Small Proteins Identified from Ribosome Profiling
por: Li, Yanyan, et al.
Publicado: (2021)

EDomics: a comprehensive and comparative multi-omics database for animal evo-devo
por: Wei, Jiankai, et al.
Publicado: (2022)

Fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy
por: Wang, Fang, et al.
Publicado: (2022)

The Rhododendron Plant Genome Database (RPGD): a comprehensive online omics database for Rhododendron
por: Liu, Ningyawen, et al.
Publicado: (2021)

A comprehensive database for integrated analysis of omics data in autoimmune diseases
por: Martorell-Marugán, Jordi, et al.
Publicado: (2021)

Detection of candidate genes affecting milk production traits in sheep using whole‐genome sequencing analysis
por: Rezvannejad, Elham, et al.
Publicado: (2022)

MODEM: multi-omics data envelopment and mining in maize
por: Liu, Haijun, et al.
Publicado: (2016)

TmaDB: a repository for tissue microarray data
por: Sharma-Oates, Archana, et al.
Publicado: (2005)

The Cancer Omics Atlas: an integrative resource for cancer omics annotations
por: Sun, Qingrong, et al.
Publicado: (2018)

Collembase: a repository for springtail genomics and soil quality assessment
por: Timmermans, Martijn JTN, et al.
Publicado: (2007)

StreptomycesInforSys: A web-enabled information repository
por: Jain, Chakresh Kumar, et al.
Publicado: (2012)

CottonMD: a multi-omics database for cotton biological study
por: Yang, Zhiquan, et al.
Publicado: (2022)

NIDDK data repository: a central collection of clinical trial data
por: Cuticchia, A Jamie, et al.
Publicado: (2006)

Genome Warehouse: A Public Repository Housing Genome-scale Data
por: Chen, Meili, et al.
Publicado: (2021)

Lantern: an integrative repository of functional annotations for lncRNAs in the human genome
por: Daulatabad, Swapna Vidhur, et al.
Publicado: (2021)

LinkedOmics: analyzing multi-omics data within and across 32 cancer types
por: Vasaikar, Suhas V, et al.
Publicado: (2018)

MVIP: multi-omics portal of viral infection
por: Tang, Zhidong, et al.
Publicado: (2021)

ApicoTFdb: the comprehensive web repository of apicomplexan transcription factors and transcription-associated co-factors
por: Sardar, Rahila, et al.
Publicado: (2019)

New Jersey Center for Tourette Syndrome Sharing Repository: methods and sample description
por: Heiman, Gary A, et al.
Publicado: (2008)

SLOAD: a comprehensive database of cancer-specific synthetic lethal interactions for precision cancer therapy via multi-omics analysis
por: Guo, Li, et al.
Publicado: (2022)

MicroarrayDesigner: an online search tool and repository for near-optimal microarray experimental designs
por: Sacan, Ahmet, et al.
Publicado: (2009)

ARA-PEPs: a repository of putative sORF-encoded peptides in Arabidopsis thaliana
por: Hazarika, Rashmi R., et al.
Publicado: (2017)

OGP: A Repository of Experimentally Characterized O-glycoproteins to Facilitate Studies on O-glycosylation
por: Huang, Jiangming, et al.
Publicado: (2021)

The Yeast Resource Center Public Image Repository: A large database of fluorescence microscopy images
por: Riffle, Michael, et al.
Publicado: (2010)

Ssa miRNAs DB: Online repository of in silico predicted miRNAs in Salmo salar
por: Reyes, Daniela, et al.
Publicado: (2012)

QSAR DataBank repository: open and linked qualitative and quantitative structure–activity relationship models
por: Ruusmann, V, et al.
Publicado: (2015)

Multi-omics molecular biomarkers and database of osteoarthritis
por: Li, Jianhua, et al.
Publicado: (2022)

KiMoSys: a web-based repository of experimental data for KInetic MOdels of biological SYStems
por: Costa, Rafael S, et al.
Publicado: (2014)

The 1000IBD project: multi-omics data of 1000 inflammatory bowel disease patients; data release 1
por: Imhann, Floris, et al.
Publicado: (2019)

RNAInter in 2020: RNA interactome repository with increased coverage and annotation
por: Lin, Yunqing, et al.
Publicado: (2020)

MNDR v3.0: mammal ncRNA–disease repository with increased coverage and annotation
por: Ning, Lin, et al.
Publicado: (2020)

The SWISS-MODEL Repository—new features and functionality
por: Bienert, Stefan, et al.
Publicado: (2017)

IDPsBind: a repository of binding sites for intrinsically disordered proteins complexes with known 3D structures
por: Sun, CanZhuang, et al.
Publicado: (2022)

Comparative genomic analysis uncovers candidate genes related with milk production and adaptive traits in goat breeds
por: Amiri Ghanatsaman, Zeinab, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_bpfac8mvdda8b87vg6v2ks4cda