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Application of Principal Component Analysis (PCA) to the Evaluation and Screening of Multiactivity Fungi

Continued innovation in screening methodologies remains important for the discovery of high-quality multiactive fungi, which have been of great significance to the development of new drugs. Mangrove-derived fungi, which are well recognized as prolific sources of natural products, are worth sustained...

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Autores principales: Yang, Zonglin, Shi, Yaqi, Li, Pinglin, Pan, Kanghong, Li, Guoqiang, Li, Xianguo, Yao, Shuo, Zhang, Dahai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Science Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9098371/
https://www.ncbi.nlm.nih.gov/pubmed/35582545
http://dx.doi.org/10.1007/s11802-022-5096-x
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author Yang, Zonglin
Shi, Yaqi
Li, Pinglin
Pan, Kanghong
Li, Guoqiang
Li, Xianguo
Yao, Shuo
Zhang, Dahai
author_facet Yang, Zonglin
Shi, Yaqi
Li, Pinglin
Pan, Kanghong
Li, Guoqiang
Li, Xianguo
Yao, Shuo
Zhang, Dahai
author_sort Yang, Zonglin
collection PubMed
description Continued innovation in screening methodologies remains important for the discovery of high-quality multiactive fungi, which have been of great significance to the development of new drugs. Mangrove-derived fungi, which are well recognized as prolific sources of natural products, are worth sustained attention and further study. In this study, 118 fungi, which mainly included Aspergillus spp. (34.62%) and Penicillium spp. (15.38%), were isolated from the mangrove ecosystem of the Maowei Sea, and 83.1% of the cultured fungi showed at least one bioactivity in four antibacterial and three antioxidant assays. To accurately evaluate the fungal bioactivities, the fungi with multiple bioactivities were successfully evaluated and screened by principal component analysis (PCA), and this analysis provided a dataset for comparing and selecting multibioactive fungi. Among the 118 mangrove-derived fungi tested in this study, Aspergillus spp. showed the best comprehensive activity. Fungi such as A. clavatonanicus, A. flavipes and A. citrinoterreus, which exhibited high comprehensive bioactivity as determined by the PCA, have great potential in the exploitation of natural products and the development of new drugs. This study demonstrated the first use of PCA as a time-saving, scientific method with a strong ability to evaluate and screen multiactive fungi, which indicated that this method can affect the discovery and development of new drugs.
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spelling pubmed-90983712022-05-13 Application of Principal Component Analysis (PCA) to the Evaluation and Screening of Multiactivity Fungi Yang, Zonglin Shi, Yaqi Li, Pinglin Pan, Kanghong Li, Guoqiang Li, Xianguo Yao, Shuo Zhang, Dahai J Ocean Univ China Article Continued innovation in screening methodologies remains important for the discovery of high-quality multiactive fungi, which have been of great significance to the development of new drugs. Mangrove-derived fungi, which are well recognized as prolific sources of natural products, are worth sustained attention and further study. In this study, 118 fungi, which mainly included Aspergillus spp. (34.62%) and Penicillium spp. (15.38%), were isolated from the mangrove ecosystem of the Maowei Sea, and 83.1% of the cultured fungi showed at least one bioactivity in four antibacterial and three antioxidant assays. To accurately evaluate the fungal bioactivities, the fungi with multiple bioactivities were successfully evaluated and screened by principal component analysis (PCA), and this analysis provided a dataset for comparing and selecting multibioactive fungi. Among the 118 mangrove-derived fungi tested in this study, Aspergillus spp. showed the best comprehensive activity. Fungi such as A. clavatonanicus, A. flavipes and A. citrinoterreus, which exhibited high comprehensive bioactivity as determined by the PCA, have great potential in the exploitation of natural products and the development of new drugs. This study demonstrated the first use of PCA as a time-saving, scientific method with a strong ability to evaluate and screen multiactive fungi, which indicated that this method can affect the discovery and development of new drugs. Science Press 2022-05-13 2022 /pmc/articles/PMC9098371/ /pubmed/35582545 http://dx.doi.org/10.1007/s11802-022-5096-x Text en © Ocean University of China, Science Press and Springer-Verlag GmbH Germany 2022 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Yang, Zonglin
Shi, Yaqi
Li, Pinglin
Pan, Kanghong
Li, Guoqiang
Li, Xianguo
Yao, Shuo
Zhang, Dahai
Application of Principal Component Analysis (PCA) to the Evaluation and Screening of Multiactivity Fungi
title Application of Principal Component Analysis (PCA) to the Evaluation and Screening of Multiactivity Fungi
title_full Application of Principal Component Analysis (PCA) to the Evaluation and Screening of Multiactivity Fungi
title_fullStr Application of Principal Component Analysis (PCA) to the Evaluation and Screening of Multiactivity Fungi
title_full_unstemmed Application of Principal Component Analysis (PCA) to the Evaluation and Screening of Multiactivity Fungi
title_short Application of Principal Component Analysis (PCA) to the Evaluation and Screening of Multiactivity Fungi
title_sort application of principal component analysis (pca) to the evaluation and screening of multiactivity fungi
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9098371/
https://www.ncbi.nlm.nih.gov/pubmed/35582545
http://dx.doi.org/10.1007/s11802-022-5096-x
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