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Insight of the Functional and Biological Activities of Coconut (Cocos nucifera L.) Protein by Proteomics Analysis and Protein-Based Bioinformatics

Coconut (Cocos nucifera L.) is one of the most critical economic crops in the tropics and sub-tropics. Although coconut protein has attracted more and more attention due to its nutritional potential, the lack of proteomic information has limited its practical application. The present study aimed to...

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Detalles Bibliográficos
Autores principales: Ma, Jingrong, Pan, Chuang, Chen, Haiming, Chen, Weijun, Chen, Wenxue, Zhang, Ming, Zhong, Qiuping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9100645/
https://www.ncbi.nlm.nih.gov/pubmed/35566340
http://dx.doi.org/10.3390/molecules27092987
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author Ma, Jingrong
Pan, Chuang
Chen, Haiming
Chen, Weijun
Chen, Wenxue
Zhang, Ming
Zhong, Qiuping
author_facet Ma, Jingrong
Pan, Chuang
Chen, Haiming
Chen, Weijun
Chen, Wenxue
Zhang, Ming
Zhong, Qiuping
author_sort Ma, Jingrong
collection PubMed
description Coconut (Cocos nucifera L.) is one of the most critical economic crops in the tropics and sub-tropics. Although coconut protein has attracted more and more attention due to its nutritional potential, the lack of proteomic information has limited its practical application. The present study aimed to investigate the coconut meat proteome by shotgun proteomics and protein-based bioinformatic analysis. A grand total of 1686 proteins were identified by searching the National Center for Biotechnology Information (NCBI) protein database and self-constructed C. nucifera transcriptome repository. Among them, 17 and 9 proteins were identified as antioxidant proteins and globulins, respectively. Network analysis of the globulins referred to the sub-works of Cupin and Oleosin, and the antioxidant proteins were related to the sub-networks of glutathione metabolism and peroxisome. The bioactive peptides acquired by in-silico digestion of the targeted proteins have the potential to be applied as antioxidants and emulsifiers for both healthcare and food stabilization.
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spelling pubmed-91006452022-05-14 Insight of the Functional and Biological Activities of Coconut (Cocos nucifera L.) Protein by Proteomics Analysis and Protein-Based Bioinformatics Ma, Jingrong Pan, Chuang Chen, Haiming Chen, Weijun Chen, Wenxue Zhang, Ming Zhong, Qiuping Molecules Article Coconut (Cocos nucifera L.) is one of the most critical economic crops in the tropics and sub-tropics. Although coconut protein has attracted more and more attention due to its nutritional potential, the lack of proteomic information has limited its practical application. The present study aimed to investigate the coconut meat proteome by shotgun proteomics and protein-based bioinformatic analysis. A grand total of 1686 proteins were identified by searching the National Center for Biotechnology Information (NCBI) protein database and self-constructed C. nucifera transcriptome repository. Among them, 17 and 9 proteins were identified as antioxidant proteins and globulins, respectively. Network analysis of the globulins referred to the sub-works of Cupin and Oleosin, and the antioxidant proteins were related to the sub-networks of glutathione metabolism and peroxisome. The bioactive peptides acquired by in-silico digestion of the targeted proteins have the potential to be applied as antioxidants and emulsifiers for both healthcare and food stabilization. MDPI 2022-05-06 /pmc/articles/PMC9100645/ /pubmed/35566340 http://dx.doi.org/10.3390/molecules27092987 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ma, Jingrong
Pan, Chuang
Chen, Haiming
Chen, Weijun
Chen, Wenxue
Zhang, Ming
Zhong, Qiuping
Insight of the Functional and Biological Activities of Coconut (Cocos nucifera L.) Protein by Proteomics Analysis and Protein-Based Bioinformatics
title Insight of the Functional and Biological Activities of Coconut (Cocos nucifera L.) Protein by Proteomics Analysis and Protein-Based Bioinformatics
title_full Insight of the Functional and Biological Activities of Coconut (Cocos nucifera L.) Protein by Proteomics Analysis and Protein-Based Bioinformatics
title_fullStr Insight of the Functional and Biological Activities of Coconut (Cocos nucifera L.) Protein by Proteomics Analysis and Protein-Based Bioinformatics
title_full_unstemmed Insight of the Functional and Biological Activities of Coconut (Cocos nucifera L.) Protein by Proteomics Analysis and Protein-Based Bioinformatics
title_short Insight of the Functional and Biological Activities of Coconut (Cocos nucifera L.) Protein by Proteomics Analysis and Protein-Based Bioinformatics
title_sort insight of the functional and biological activities of coconut (cocos nucifera l.) protein by proteomics analysis and protein-based bioinformatics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9100645/
https://www.ncbi.nlm.nih.gov/pubmed/35566340
http://dx.doi.org/10.3390/molecules27092987
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