Cargando…

APEX2-Mediated Proximity Labeling Resolves the DDIT4-Interacting Proteome

DNA damage-inducible transcript 4 (DDIT4) is a ubiquitous protein whose expression is transiently increased in response to various stressors. Chronic expression has been linked to various pathologies, including neurodegeneration, inflammation, and cancer. DDIT4 is best recognized for repressing mTOR...

Descripción completa

Detalles Bibliográficos
Autores principales:	Naki, Marianna, Gourdomichali, Olga, Zonke, Katerina, Kattan, Fedon-Giasin, Makridakis, Manousos, Kontostathi, Georgia, Vlahou, Antonia, Doxakis, Epaminondas
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9102673/ https://www.ncbi.nlm.nih.gov/pubmed/35563580 http://dx.doi.org/10.3390/ijms23095189

Ejemplares similares

In Situ Peroxidase Labeling Followed by Mass-Spectrometry Reveals TIA1 Interactome
por: Gourdomichali, Olga, et al.
Publicado: (2022)

Unraveling the Pathways to Neuronal Homeostasis and Disease: Mechanistic Insights into the Role of RNA-Binding Proteins and Associated Factors
por: Ravanidis, Stylianos, et al.
Publicado: (2018)

RNA binding protein AUF1/HNRNPD regulates nuclear export, stability and translation of SNCA transcripts
por: Kattan, Fedon-Giasin, et al.
Publicado: (2023)

Multiplexed MRM-based protein quantification of putative prognostic biomarkers for chronic kidney disease progression in plasma
por: Makridakis, Manousos, et al.
Publicado: (2020)

Cervical Cancer Cell Line Secretome Highlights the Roles of Transforming Growth Factor-Beta-Induced Protein ig-h3, Peroxiredoxin-2, and NRF2 on Cervical Carcinogenesis
por: Kontostathi, Georgia, et al.
Publicado: (2017)

A Proteomic Approach to Study the Biological Role of Hepatitis C Virus Protein Core+1/ARFP
por: Vrazas, Vasileios, et al.
Publicado: (2022)

Urinary peptidomics analysis reveals proteases involved in diabetic nephropathy
por: Krochmal, Magdalena, et al.
Publicado: (2017)

Principles of miRNA-Target Regulation in Metazoan Models
por: Doxakis, Epaminondas
Publicado: (2013)

Insights into the multifaceted role of circular RNAs: implications for Parkinson’s disease pathogenesis and diagnosis
por: Doxakis, Epaminondas
Publicado: (2022)

APEX3 – an optimized tool for rapid and unbiased proximity labeling
por: Becker, Jordan T., et al.
Publicado: (2023)

Glycosylation Analysis of Urinary Peptidome Highlights IGF2 Glycopeptides in Association with CKD
por: Lohia, Sonnal, et al.
Publicado: (2023)

APEX2 Proximity Proteomics Resolves Flagellum Subdomains and Identifies Flagellum Tip-Specific Proteins in Trypanosoma brucei
por: Vélez-Ramírez, Daniel E., et al.
Publicado: (2021)

Molecular Changes in Tissue Proteome during Prostate Cancer Development: Proof-of-Principle Investigation
por: Latosinska, Agnieszka, et al.
Publicado: (2020)

Neurofibromin 1 Is a miRNA Target in Neurons
por: Paschou, Maria, et al.
Publicado: (2012)

miR-7 and miR-153 protect neurons against MPP(+)-induced cell death via upregulation of mTOR pathway
por: Fragkouli, Apostolia, et al.
Publicado: (2014)

Constitutive translation of human α-synuclein is mediated by the 5′-untranslated region
por: Koukouraki, Pelagia, et al.
Publicado: (2016)

RNA-Binding Proteins Implicated in Mitochondrial Damage and Mitophagy
por: Ravanidis, Stylianos, et al.
Publicado: (2020)

DDIT3 Expression in Liposarcoma Development
por: Kåbjörn Gustafsson, Christina, et al.
Publicado: (2014)

NETs decorated with bioactive IL-33 infiltrate inflamed tissues and induce IFN-α production in patients with SLE
por: Georgakis, Spiros, et al.
Publicado: (2021)

Comparative Analysis of Label-Free and 8-Plex iTRAQ Approach for Quantitative Tissue Proteomic Analysis
por: Latosinska, Agnieszka, et al.
Publicado: (2015)

Functional secretome analysis reveals Annexin-A1 as important paracrine factor derived from fetal mesenchymal stem cells in hepatic regeneration
por: Zagoura, Dimitra, et al.
Publicado: (2019)

The ERAP1 active site cannot productively access the N-terminus of antigenic peptide precursors stably bound onto MHC class I
por: Mavridis, George, et al.
Publicado: (2021)

The FUS-DDIT3 Interactome in Myxoid Liposarcoma()
por: Yu, Jamie S.E., et al.
Publicado: (2019)

DDIT4 Novel Mutations in Pancreatic Cancer
por: Ding, Fadian, et al.
Publicado: (2021)

The GABARAP Co-Secretome Identified by APEX2-GABARAP Proximity Labelling of Extracellular Vesicles
por: Sanwald, Julia L., et al.
Publicado: (2020)

APEX2-Mediated Proximity Labeling of Wnt Receptor Interactors Upon Pathway Activation
por: Rim, Ellen Youngsoo, et al.
Publicado: (2023)

DDIT3/CHOP and the sarcoma fusion oncoprotein FUS-DDIT3/TLS-CHOP bind cyclin-dependent kinase 2
por: Bento, Christoffer, et al.
Publicado: (2009)

In vitro and in vivo properties of distinct populations of amniotic fluid mesenchymal progenitor cells
por: Roubelakis, Maria G, et al.
Publicado: (2011)

Plasma proteomic analysis reveals altered protein abundances in cardiovascular disease
por: Lygirou, Vasiliki, et al.
Publicado: (2018)

Probing the Environment of Emerin by Enhanced Ascorbate Peroxidase 2 (APEX2)-Mediated Proximity Labeling
por: Müller, Marret, et al.
Publicado: (2020)

Defining Proximity Proteome of Histone Modifications by Antibody-mediated Protein A-APEX2 Labeling
por: Li, Xinran, et al.
Publicado: (2022)

DDIT3 antagonizes innate immune response to promote bovine alphaherpesvirus 1 replication via the DDIT3-SQSTM1-STING pathway
por: Wang, Song, et al.
Publicado: (2022)

Integrative analysis of extracellular and intracellular bladder cancer cell line proteome with transcriptome: improving coverage and validity of –omics findings
por: Latosinska, Agnieszka, et al.
Publicado: (2016)

Insights into Biomechanical and Proteomic Characteristics of Small Diameter Vascular Grafts Utilizing the Human Umbilical Artery
por: Mallis, Panagiotis, et al.
Publicado: (2020)

Short Term Results of Fibrin Gel Obtained from Cord Blood Units: A Preliminary in Vitro Study
por: Mallis, Panagiotis, et al.
Publicado: (2019)

Patient-specific factors in the proximity of the inferior alveolar nerve to the tooth apex
por: Adigüzel, Özkan, et al.
Publicado: (2012)

An APEX2 proximity ligation method for mapping interactions with the nuclear lamina
por: Tran, Joseph R., et al.
Publicado: (2020)

Proximity of maxillary molar apexes to the cortical bone surface and the maxillary sinus
por: Lee, Han Shin, et al.
Publicado: (2022)

Methylation status of DDIT3 gene in Chronic Myeloid Leukemia
por: Wang, Ya-li, et al.
Publicado: (2010)

DDIT4 overexpression associates with poor prognosis in lung adenocarcinoma
por: Song, Li, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_frdh7rugm6s5m42jl3i3mc5r07