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RAGE is a potential biomarker implicated in immune infiltrates and cellular senescence in lung adenocarcinoma
BACKGROUND: Receptor for Advanced Glycation End‐products (RAGE) is an oncogene abnormally expressed in various cancers. However, the clinical value of RAGE and the biological role of RAGE in lung cancer have not been fully investigated. METHODS: We compared the RAGE expression using several public d...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9102728/ https://www.ncbi.nlm.nih.gov/pubmed/35358337 http://dx.doi.org/10.1002/jcla.24382 |
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author | Lin, Zhihui Yu, Biyun Yuan, Li Tu, Jinjing Shao, Chuan Tang, Yaodong |
author_facet | Lin, Zhihui Yu, Biyun Yuan, Li Tu, Jinjing Shao, Chuan Tang, Yaodong |
author_sort | Lin, Zhihui |
collection | PubMed |
description | BACKGROUND: Receptor for Advanced Glycation End‐products (RAGE) is an oncogene abnormally expressed in various cancers. However, the clinical value of RAGE and the biological role of RAGE in lung cancer have not been fully investigated. METHODS: We compared the RAGE expression using several public databases. The relationship between RAGE expression and clinicopathological variables was assessed. The R software package was used to carry out enrichment analyses of RAGE co‐expression and gene set enrichment analysis (GSEA). Additionally, we used the TIMER database to assess the association between immune infiltration and RAGE expression. The correlation between RAGE expression and senescence biomarkers in lung adenocarcinoma was analyzed using the TCGA database. RESULTS: Our findings indicated that the expression of RAGE was downregulated in lung adenocarcinoma, and down‐regulation of RAGE was related to poor overall survival and disease‐free survival. Functional enrichment analysis indicated that RAGE co‐expression genes were mainly associated with neutrophil activation involved in immune response, neutrophil degranulation, and regulation of leukocyte‐mediated immunity. Correlation analysis revealed that RAGE expression was closely related to the purity of the tumor and immune infiltration. GSEA indicated that the RAGE‐related differential genes were mainly enriched in senescence‐related pathways. Besides, the RAGE expression was significantly associated with senescence‐related genes. CONCLUSION: Down‐regulation of RAGE expression was associated with poor prognosis, as well as defective immune infiltration and cellular senescence in lung adenocarcinoma. |
format | Online Article Text |
id | pubmed-9102728 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91027282022-05-18 RAGE is a potential biomarker implicated in immune infiltrates and cellular senescence in lung adenocarcinoma Lin, Zhihui Yu, Biyun Yuan, Li Tu, Jinjing Shao, Chuan Tang, Yaodong J Clin Lab Anal Research Articles BACKGROUND: Receptor for Advanced Glycation End‐products (RAGE) is an oncogene abnormally expressed in various cancers. However, the clinical value of RAGE and the biological role of RAGE in lung cancer have not been fully investigated. METHODS: We compared the RAGE expression using several public databases. The relationship between RAGE expression and clinicopathological variables was assessed. The R software package was used to carry out enrichment analyses of RAGE co‐expression and gene set enrichment analysis (GSEA). Additionally, we used the TIMER database to assess the association between immune infiltration and RAGE expression. The correlation between RAGE expression and senescence biomarkers in lung adenocarcinoma was analyzed using the TCGA database. RESULTS: Our findings indicated that the expression of RAGE was downregulated in lung adenocarcinoma, and down‐regulation of RAGE was related to poor overall survival and disease‐free survival. Functional enrichment analysis indicated that RAGE co‐expression genes were mainly associated with neutrophil activation involved in immune response, neutrophil degranulation, and regulation of leukocyte‐mediated immunity. Correlation analysis revealed that RAGE expression was closely related to the purity of the tumor and immune infiltration. GSEA indicated that the RAGE‐related differential genes were mainly enriched in senescence‐related pathways. Besides, the RAGE expression was significantly associated with senescence‐related genes. CONCLUSION: Down‐regulation of RAGE expression was associated with poor prognosis, as well as defective immune infiltration and cellular senescence in lung adenocarcinoma. John Wiley and Sons Inc. 2022-03-31 /pmc/articles/PMC9102728/ /pubmed/35358337 http://dx.doi.org/10.1002/jcla.24382 Text en © 2022 The Authors. Journal of Clinical Laboratory Analysis published by Wiley Periodicals LLC https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Lin, Zhihui Yu, Biyun Yuan, Li Tu, Jinjing Shao, Chuan Tang, Yaodong RAGE is a potential biomarker implicated in immune infiltrates and cellular senescence in lung adenocarcinoma |
title | RAGE is a potential biomarker implicated in immune infiltrates and cellular senescence in lung adenocarcinoma |
title_full | RAGE is a potential biomarker implicated in immune infiltrates and cellular senescence in lung adenocarcinoma |
title_fullStr | RAGE is a potential biomarker implicated in immune infiltrates and cellular senescence in lung adenocarcinoma |
title_full_unstemmed | RAGE is a potential biomarker implicated in immune infiltrates and cellular senescence in lung adenocarcinoma |
title_short | RAGE is a potential biomarker implicated in immune infiltrates and cellular senescence in lung adenocarcinoma |
title_sort | rage is a potential biomarker implicated in immune infiltrates and cellular senescence in lung adenocarcinoma |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9102728/ https://www.ncbi.nlm.nih.gov/pubmed/35358337 http://dx.doi.org/10.1002/jcla.24382 |
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