Cargando…

Exploration of the Genetic Diversity of Solina Wheat and Its Implication for Grain Quality

Different Solina wheat accessions (n = 24) collected in the Abruzzo region (Italy) were studied using 45,000 SNP markers generated from the DarTseq platform. The structure of genetic data was analyzed by Principal Component Analysis and Hierarchical Cluster analysis that revealed the existence of tw...

Descripción completa

Detalles Bibliográficos
Autores principales: De Flaviis, Riccardo, Tumino, Giorgio, Terzi, Valeria, Morcia, Caterina, Santarelli, Veronica, Sacchetti, Giampiero, Mastrocola, Dino
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9102871/
https://www.ncbi.nlm.nih.gov/pubmed/35567171
http://dx.doi.org/10.3390/plants11091170
_version_ 1784707429808734208
author De Flaviis, Riccardo
Tumino, Giorgio
Terzi, Valeria
Morcia, Caterina
Santarelli, Veronica
Sacchetti, Giampiero
Mastrocola, Dino
author_facet De Flaviis, Riccardo
Tumino, Giorgio
Terzi, Valeria
Morcia, Caterina
Santarelli, Veronica
Sacchetti, Giampiero
Mastrocola, Dino
author_sort De Flaviis, Riccardo
collection PubMed
description Different Solina wheat accessions (n = 24) collected in the Abruzzo region (Italy) were studied using 45,000 SNP markers generated from the DarTseq platform. The structure of genetic data was analyzed by Principal Component Analysis and Hierarchical Cluster analysis that revealed the existence of two main clusters (Clu1 and Clu2) characterized by samples with different geographical origin. The Solina genetic dataset was further merged and analyzed with a public genetic one provided by CIMMYT containing 25,963 genotypes from all over the world. The Solina accessions occupied a vast space, thus confirming a high heterogeneity of this landrace that, nevertheless, is considerably unique and placed quite far from other clusters. Clu1 and Clu2 divergence were clearly visible. Solina clusters were genetically closer to landraces from Turkey and the central fertile crescent than to the Italian genotypes present in the dataset. Selected commercial quality traits of accessions of the two Solina clusters were analyzed (yield, thousand kernel weight, test weight, and protein content), and significant differences were found between clusters. The results of this investigation did not highlight any relationships of Solina with Italian genotypes, and confirmed its wide genetic diversity by permitting to identify two genetic groups with distinct origin and quality traits.
format Online
Article
Text
id pubmed-9102871
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-91028712022-05-14 Exploration of the Genetic Diversity of Solina Wheat and Its Implication for Grain Quality De Flaviis, Riccardo Tumino, Giorgio Terzi, Valeria Morcia, Caterina Santarelli, Veronica Sacchetti, Giampiero Mastrocola, Dino Plants (Basel) Article Different Solina wheat accessions (n = 24) collected in the Abruzzo region (Italy) were studied using 45,000 SNP markers generated from the DarTseq platform. The structure of genetic data was analyzed by Principal Component Analysis and Hierarchical Cluster analysis that revealed the existence of two main clusters (Clu1 and Clu2) characterized by samples with different geographical origin. The Solina genetic dataset was further merged and analyzed with a public genetic one provided by CIMMYT containing 25,963 genotypes from all over the world. The Solina accessions occupied a vast space, thus confirming a high heterogeneity of this landrace that, nevertheless, is considerably unique and placed quite far from other clusters. Clu1 and Clu2 divergence were clearly visible. Solina clusters were genetically closer to landraces from Turkey and the central fertile crescent than to the Italian genotypes present in the dataset. Selected commercial quality traits of accessions of the two Solina clusters were analyzed (yield, thousand kernel weight, test weight, and protein content), and significant differences were found between clusters. The results of this investigation did not highlight any relationships of Solina with Italian genotypes, and confirmed its wide genetic diversity by permitting to identify two genetic groups with distinct origin and quality traits. MDPI 2022-04-26 /pmc/articles/PMC9102871/ /pubmed/35567171 http://dx.doi.org/10.3390/plants11091170 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
De Flaviis, Riccardo
Tumino, Giorgio
Terzi, Valeria
Morcia, Caterina
Santarelli, Veronica
Sacchetti, Giampiero
Mastrocola, Dino
Exploration of the Genetic Diversity of Solina Wheat and Its Implication for Grain Quality
title Exploration of the Genetic Diversity of Solina Wheat and Its Implication for Grain Quality
title_full Exploration of the Genetic Diversity of Solina Wheat and Its Implication for Grain Quality
title_fullStr Exploration of the Genetic Diversity of Solina Wheat and Its Implication for Grain Quality
title_full_unstemmed Exploration of the Genetic Diversity of Solina Wheat and Its Implication for Grain Quality
title_short Exploration of the Genetic Diversity of Solina Wheat and Its Implication for Grain Quality
title_sort exploration of the genetic diversity of solina wheat and its implication for grain quality
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9102871/
https://www.ncbi.nlm.nih.gov/pubmed/35567171
http://dx.doi.org/10.3390/plants11091170
work_keys_str_mv AT deflaviisriccardo explorationofthegeneticdiversityofsolinawheatanditsimplicationforgrainquality
AT tuminogiorgio explorationofthegeneticdiversityofsolinawheatanditsimplicationforgrainquality
AT terzivaleria explorationofthegeneticdiversityofsolinawheatanditsimplicationforgrainquality
AT morciacaterina explorationofthegeneticdiversityofsolinawheatanditsimplicationforgrainquality
AT santarelliveronica explorationofthegeneticdiversityofsolinawheatanditsimplicationforgrainquality
AT sacchettigiampiero explorationofthegeneticdiversityofsolinawheatanditsimplicationforgrainquality
AT mastrocoladino explorationofthegeneticdiversityofsolinawheatanditsimplicationforgrainquality