The Development of Two High-Yield and High-Quality Functional Rice Cultivars Using Marker-Assisted Selection and Conventional Breeding Methods

Rice (Oryza sativa L.) is an important crop worldwide. Functional rice has exhibited health benefits. The aim of this study was to use marker-assisted selection (MAS) to introgress two genes, GE (giant embryo) and OsALDH7 (aldehyde dehydrogenase, golden-like endosperm) into colored rice and obtain high yield functional rice. CNY103108 and CNY103107 are two rice lines with golden-like endosperms and giant embryos. They were used as the donor parents. CNY922401, an elite purple waxy rice line, and TNGSW26, an indica red waxy rice cultivar were used as the recurrent parents. Foreground selection of the progenies was completed using functional markers for GE and OsALDH7, and background selection was completed using molecular markers to recover the background of the recurrent parents. MAS results showed a purple functional rice population (PFR) (CNY922401/CNY103108), with the recovery rate of the recurrent parental genome as 91.3%, and a red functional rice population (RFR) (TNGSW26/CNY103107) with the recovery as 89.8%. After five-season yield trials and several antioxidant activities analyses, PFR32 and RFR13 lines, which have similar yields and antioxidant activities, were selected as the recurrent parents with a golden-like endosperm and a giant embryo. For a biofortification purpose, they can become valuable products and be adapted to the current agricultural community.