Cargando…

Novel QTL for Low Seed Cadmium Accumulation in Soybean

Soybean is a valuable crop, used in animal feed and for human consumption. Selecting soybean cultivars with low seed cadmium (Cd) concentration is important for the purpose of minimizing the transfer of Cd into the human body. To ensure international trade, farmers need to produce soybean that meets...

Descripción completa

Detalles Bibliográficos
Autores principales: Nissan, Nour, Hooker, Julia, Pattang, Arezo, Charette, Martin, Morrison, Malcolm, Yu, Kangfu, Hou, Anfu, Golshani, Ashkan, Molnar, Stephen J., Cober, Elroy R., Samanfar, Bahram
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9102923/
https://www.ncbi.nlm.nih.gov/pubmed/35567147
http://dx.doi.org/10.3390/plants11091146
_version_ 1784707442245894144
author Nissan, Nour
Hooker, Julia
Pattang, Arezo
Charette, Martin
Morrison, Malcolm
Yu, Kangfu
Hou, Anfu
Golshani, Ashkan
Molnar, Stephen J.
Cober, Elroy R.
Samanfar, Bahram
author_facet Nissan, Nour
Hooker, Julia
Pattang, Arezo
Charette, Martin
Morrison, Malcolm
Yu, Kangfu
Hou, Anfu
Golshani, Ashkan
Molnar, Stephen J.
Cober, Elroy R.
Samanfar, Bahram
author_sort Nissan, Nour
collection PubMed
description Soybean is a valuable crop, used in animal feed and for human consumption. Selecting soybean cultivars with low seed cadmium (Cd) concentration is important for the purpose of minimizing the transfer of Cd into the human body. To ensure international trade, farmers need to produce soybean that meets the European Union (EU) Cd limit of 0.2 mg kg(−1). In this study, we evaluated two populations of recombinant inbred lines (RILs), X5154 and X4050, for seed Cd accumulation. Linkage maps were constructed with 325 and 280 polymorphic simple sequence repeat (SSR) markers, respectively, and used to identify a novel minor quantitative trait locus (QTL) on chromosome 13 in the X4050 population between SSR markers Satt522 and Satt218. Based on a gene ontology search within the QTL region, seven genes were identified as candidates responsible for low seed Cd accumulation, including Glyma.13G308700 and Glyma.13G309100. In addition, we confirmed the known major gene, Cda1, in the X5154 population and developed KASP and CAPS/dCAPS allele-specific markers for efficient marker-assisted breeding for Cda1.
format Online
Article
Text
id pubmed-9102923
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-91029232022-05-14 Novel QTL for Low Seed Cadmium Accumulation in Soybean Nissan, Nour Hooker, Julia Pattang, Arezo Charette, Martin Morrison, Malcolm Yu, Kangfu Hou, Anfu Golshani, Ashkan Molnar, Stephen J. Cober, Elroy R. Samanfar, Bahram Plants (Basel) Article Soybean is a valuable crop, used in animal feed and for human consumption. Selecting soybean cultivars with low seed cadmium (Cd) concentration is important for the purpose of minimizing the transfer of Cd into the human body. To ensure international trade, farmers need to produce soybean that meets the European Union (EU) Cd limit of 0.2 mg kg(−1). In this study, we evaluated two populations of recombinant inbred lines (RILs), X5154 and X4050, for seed Cd accumulation. Linkage maps were constructed with 325 and 280 polymorphic simple sequence repeat (SSR) markers, respectively, and used to identify a novel minor quantitative trait locus (QTL) on chromosome 13 in the X4050 population between SSR markers Satt522 and Satt218. Based on a gene ontology search within the QTL region, seven genes were identified as candidates responsible for low seed Cd accumulation, including Glyma.13G308700 and Glyma.13G309100. In addition, we confirmed the known major gene, Cda1, in the X5154 population and developed KASP and CAPS/dCAPS allele-specific markers for efficient marker-assisted breeding for Cda1. MDPI 2022-04-24 /pmc/articles/PMC9102923/ /pubmed/35567147 http://dx.doi.org/10.3390/plants11091146 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Nissan, Nour
Hooker, Julia
Pattang, Arezo
Charette, Martin
Morrison, Malcolm
Yu, Kangfu
Hou, Anfu
Golshani, Ashkan
Molnar, Stephen J.
Cober, Elroy R.
Samanfar, Bahram
Novel QTL for Low Seed Cadmium Accumulation in Soybean
title Novel QTL for Low Seed Cadmium Accumulation in Soybean
title_full Novel QTL for Low Seed Cadmium Accumulation in Soybean
title_fullStr Novel QTL for Low Seed Cadmium Accumulation in Soybean
title_full_unstemmed Novel QTL for Low Seed Cadmium Accumulation in Soybean
title_short Novel QTL for Low Seed Cadmium Accumulation in Soybean
title_sort novel qtl for low seed cadmium accumulation in soybean
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9102923/
https://www.ncbi.nlm.nih.gov/pubmed/35567147
http://dx.doi.org/10.3390/plants11091146
work_keys_str_mv AT nissannour novelqtlforlowseedcadmiumaccumulationinsoybean
AT hookerjulia novelqtlforlowseedcadmiumaccumulationinsoybean
AT pattangarezo novelqtlforlowseedcadmiumaccumulationinsoybean
AT charettemartin novelqtlforlowseedcadmiumaccumulationinsoybean
AT morrisonmalcolm novelqtlforlowseedcadmiumaccumulationinsoybean
AT yukangfu novelqtlforlowseedcadmiumaccumulationinsoybean
AT houanfu novelqtlforlowseedcadmiumaccumulationinsoybean
AT golshaniashkan novelqtlforlowseedcadmiumaccumulationinsoybean
AT molnarstephenj novelqtlforlowseedcadmiumaccumulationinsoybean
AT coberelroyr novelqtlforlowseedcadmiumaccumulationinsoybean
AT samanfarbahram novelqtlforlowseedcadmiumaccumulationinsoybean