Complete chloroplast genome characterization and phylogenetic analysis of Clematis mandshurica (Ranunculaceae)

The complete chloroplast genome sequence of Clematis mandshurica Ruprecht (1867), a specie of the Ranunculaceae family, and its phylogenetic relationships with other species have been reported in this study. The complete chloroplast genome of C. mandshurica is 159,563 bp in length, including a large...

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Autores principales: Cui, Yi, Yang, Lihua, Ding, Yanzhe, Sun, Yingxin, Wang, Jiao, Xi, Yunfei, Han, Mei, Yang, Limin, Han, Zhongming, Wang, Yunhe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9103393/
https://www.ncbi.nlm.nih.gov/pubmed/35573590
http://dx.doi.org/10.1080/23802359.2022.2073839
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author Cui, Yi
Yang, Lihua
Ding, Yanzhe
Sun, Yingxin
Wang, Jiao
Xi, Yunfei
Han, Mei
Yang, Limin
Han, Zhongming
Wang, Yunhe
author_facet Cui, Yi
Yang, Lihua
Ding, Yanzhe
Sun, Yingxin
Wang, Jiao
Xi, Yunfei
Han, Mei
Yang, Limin
Han, Zhongming
Wang, Yunhe
author_sort Cui, Yi
collection PubMed
description The complete chloroplast genome sequence of Clematis mandshurica Ruprecht (1867), a specie of the Ranunculaceae family, and its phylogenetic relationships with other species have been reported in this study. The complete chloroplast genome of C. mandshurica is 159,563 bp in length, including a large single-copy (LSC) region of 79,360 bp, a small single-copy (SSC) region of 18,121 bp, and a pair of identical inverted repeat regions (IRs) of 31,041 bp. The genome encodes a total of 132 genes, including 90 protein-coding genes, 34 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The phylogenetic analysis reveals that C. mandshurica was found to be closest to Clematis taeguensis. The complete chloroplast genome of C. mandshurica contributes to a better understanding of phylogenetic relationships among Clematis species.
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spelling pubmed-91033932022-05-14 Complete chloroplast genome characterization and phylogenetic analysis of Clematis mandshurica (Ranunculaceae) Cui, Yi Yang, Lihua Ding, Yanzhe Sun, Yingxin Wang, Jiao Xi, Yunfei Han, Mei Yang, Limin Han, Zhongming Wang, Yunhe Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Clematis mandshurica Ruprecht (1867), a specie of the Ranunculaceae family, and its phylogenetic relationships with other species have been reported in this study. The complete chloroplast genome of C. mandshurica is 159,563 bp in length, including a large single-copy (LSC) region of 79,360 bp, a small single-copy (SSC) region of 18,121 bp, and a pair of identical inverted repeat regions (IRs) of 31,041 bp. The genome encodes a total of 132 genes, including 90 protein-coding genes, 34 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The phylogenetic analysis reveals that C. mandshurica was found to be closest to Clematis taeguensis. The complete chloroplast genome of C. mandshurica contributes to a better understanding of phylogenetic relationships among Clematis species. Taylor & Francis 2022-05-10 /pmc/articles/PMC9103393/ /pubmed/35573590 http://dx.doi.org/10.1080/23802359.2022.2073839 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Cui, Yi
Yang, Lihua
Ding, Yanzhe
Sun, Yingxin
Wang, Jiao
Xi, Yunfei
Han, Mei
Yang, Limin
Han, Zhongming
Wang, Yunhe
Complete chloroplast genome characterization and phylogenetic analysis of Clematis mandshurica (Ranunculaceae)
title Complete chloroplast genome characterization and phylogenetic analysis of Clematis mandshurica (Ranunculaceae)
title_full Complete chloroplast genome characterization and phylogenetic analysis of Clematis mandshurica (Ranunculaceae)
title_fullStr Complete chloroplast genome characterization and phylogenetic analysis of Clematis mandshurica (Ranunculaceae)
title_full_unstemmed Complete chloroplast genome characterization and phylogenetic analysis of Clematis mandshurica (Ranunculaceae)
title_short Complete chloroplast genome characterization and phylogenetic analysis of Clematis mandshurica (Ranunculaceae)
title_sort complete chloroplast genome characterization and phylogenetic analysis of clematis mandshurica (ranunculaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9103393/
https://www.ncbi.nlm.nih.gov/pubmed/35573590
http://dx.doi.org/10.1080/23802359.2022.2073839
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