The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae)

Piper sarmentosum Roxb. (Piperaceae) is a traditional medicinal herb native to Southeast Asia. The complete genome of P. sarmentosum was sequenced and characterized in this study with the aim of providing genomic resources for the evolution and molecular breeding of P. sarmentosum. It has a typical...

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Autores principales: Geng, Xiaoshan, Zhu, Yulin, Ren, Zhenxin, Chen, Rong, Liu, Qin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9103586/
https://www.ncbi.nlm.nih.gov/pubmed/35573600
http://dx.doi.org/10.1080/23802359.2022.2074805
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author Geng, Xiaoshan
Zhu, Yulin
Ren, Zhenxin
Chen, Rong
Liu, Qin
author_facet Geng, Xiaoshan
Zhu, Yulin
Ren, Zhenxin
Chen, Rong
Liu, Qin
author_sort Geng, Xiaoshan
collection PubMed
description Piper sarmentosum Roxb. (Piperaceae) is a traditional medicinal herb native to Southeast Asia. The complete genome of P. sarmentosum was sequenced and characterized in this study with the aim of providing genomic resources for the evolution and molecular breeding of P. sarmentosum. It has a typical quadripartite structure, with a large single-copy (LSC) region of 88,979 bp, a small single-copy (SSC) region of 18,274 bp, and two copies of 27,068 bp inverted-repeat regions (IRa and IRb). A total of 130 genes were annotated, comprising 85 protein-coding genes (PCGs), 8 ribosomal RNA (rRNA) genes, and 37 transfer RNA (tRNA) genes. The phylogenetic tree showed that P. sarmentosum in the current study is closely related to Piper longum.
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spelling pubmed-91035862022-05-14 The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae) Geng, Xiaoshan Zhu, Yulin Ren, Zhenxin Chen, Rong Liu, Qin Mitochondrial DNA B Resour Mitogenome Announcement Piper sarmentosum Roxb. (Piperaceae) is a traditional medicinal herb native to Southeast Asia. The complete genome of P. sarmentosum was sequenced and characterized in this study with the aim of providing genomic resources for the evolution and molecular breeding of P. sarmentosum. It has a typical quadripartite structure, with a large single-copy (LSC) region of 88,979 bp, a small single-copy (SSC) region of 18,274 bp, and two copies of 27,068 bp inverted-repeat regions (IRa and IRb). A total of 130 genes were annotated, comprising 85 protein-coding genes (PCGs), 8 ribosomal RNA (rRNA) genes, and 37 transfer RNA (tRNA) genes. The phylogenetic tree showed that P. sarmentosum in the current study is closely related to Piper longum. Taylor & Francis 2022-05-12 /pmc/articles/PMC9103586/ /pubmed/35573600 http://dx.doi.org/10.1080/23802359.2022.2074805 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Geng, Xiaoshan
Zhu, Yulin
Ren, Zhenxin
Chen, Rong
Liu, Qin
The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae)
title The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae)
title_full The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae)
title_fullStr The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae)
title_full_unstemmed The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae)
title_short The complete chloroplast genome of Piper sarmentosum Roxburgh, 1820 (Piperaceae)
title_sort complete chloroplast genome of piper sarmentosum roxburgh, 1820 (piperaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9103586/
https://www.ncbi.nlm.nih.gov/pubmed/35573600
http://dx.doi.org/10.1080/23802359.2022.2074805
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