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Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae)
The complete mitochondrial genome of Phyllonorycter ringoniella (Matsumura, 1931) is characterized by a circular with 15,729 bp in size, containing 37 encoded genes and a control region. The gene order and nucleotide composition are similar to the known gracillariid mitogenomes. All protein-coding g...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9103643/ https://www.ncbi.nlm.nih.gov/pubmed/35573596 http://dx.doi.org/10.1080/23802359.2022.2072245 |
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author | Zhou, Nan Xu, Guoliang Song, Zhanbao Zhang, Shengping Meng, Chun Lv, Dezhi Yang, Sumiao |
author_facet | Zhou, Nan Xu, Guoliang Song, Zhanbao Zhang, Shengping Meng, Chun Lv, Dezhi Yang, Sumiao |
author_sort | Zhou, Nan |
collection | PubMed |
description | The complete mitochondrial genome of Phyllonorycter ringoniella (Matsumura, 1931) is characterized by a circular with 15,729 bp in size, containing 37 encoded genes and a control region. The gene order and nucleotide composition are similar to the known gracillariid mitogenomes. All protein-coding genes (PCGs) initiate with ATN and terminate with TAN, while cox1 starts with CGA, cox1, cox2, nad3, and nad5 terminate with an incomplete codon TA– or T–. All transfer RNA genes (tRNAs) can fold into typical clover-leaf structure, except for trnS1 (AGN), in which dihydrouridine stem is simplified to form a loop structure. The control region is located between 12S rRNA and trnM with relatively strong AT bias. The phylogenetic trees reveal that two subfamilies Oecophyllembiinae and Acrocercopinae were clustered together, and that clade was sister to the subfamily Lithocolletinae. All species of the genus Phyllonorycter grouped into a monophyletic clade and the P. ringoniella was closely related to P. platani. |
format | Online Article Text |
id | pubmed-9103643 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-91036432022-05-14 Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae) Zhou, Nan Xu, Guoliang Song, Zhanbao Zhang, Shengping Meng, Chun Lv, Dezhi Yang, Sumiao Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Phyllonorycter ringoniella (Matsumura, 1931) is characterized by a circular with 15,729 bp in size, containing 37 encoded genes and a control region. The gene order and nucleotide composition are similar to the known gracillariid mitogenomes. All protein-coding genes (PCGs) initiate with ATN and terminate with TAN, while cox1 starts with CGA, cox1, cox2, nad3, and nad5 terminate with an incomplete codon TA– or T–. All transfer RNA genes (tRNAs) can fold into typical clover-leaf structure, except for trnS1 (AGN), in which dihydrouridine stem is simplified to form a loop structure. The control region is located between 12S rRNA and trnM with relatively strong AT bias. The phylogenetic trees reveal that two subfamilies Oecophyllembiinae and Acrocercopinae were clustered together, and that clade was sister to the subfamily Lithocolletinae. All species of the genus Phyllonorycter grouped into a monophyletic clade and the P. ringoniella was closely related to P. platani. Taylor & Francis 2022-05-10 /pmc/articles/PMC9103643/ /pubmed/35573596 http://dx.doi.org/10.1080/23802359.2022.2072245 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhou, Nan Xu, Guoliang Song, Zhanbao Zhang, Shengping Meng, Chun Lv, Dezhi Yang, Sumiao Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae) |
title | Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae) |
title_full | Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae) |
title_fullStr | Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae) |
title_full_unstemmed | Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae) |
title_short | Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae) |
title_sort | complete mitochondrial genome of phyllonorycter ringoniella (lepidoptera: gracillariidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9103643/ https://www.ncbi.nlm.nih.gov/pubmed/35573596 http://dx.doi.org/10.1080/23802359.2022.2072245 |
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