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Generating Full-Field Digital Mammogram From Digitized Screen-Film Mammogram for Breast Cancer Screening With High-Resolution Generative Adversarial Network
PURPOSE: Developing deep learning algorithms for breast cancer screening is limited due to the lack of labeled full-field digital mammograms (FFDMs). Since FFDM is a new technique that rose in recent decades and replaced digitized screen-film mammograms (DFM) as the main technique for breast cancer...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9105019/ https://www.ncbi.nlm.nih.gov/pubmed/35574397 http://dx.doi.org/10.3389/fonc.2022.868257 |
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author | Zhou, Yuanpin Wei, Jun Wu, Dongmei Zhang, Yaqin |
author_facet | Zhou, Yuanpin Wei, Jun Wu, Dongmei Zhang, Yaqin |
author_sort | Zhou, Yuanpin |
collection | PubMed |
description | PURPOSE: Developing deep learning algorithms for breast cancer screening is limited due to the lack of labeled full-field digital mammograms (FFDMs). Since FFDM is a new technique that rose in recent decades and replaced digitized screen-film mammograms (DFM) as the main technique for breast cancer screening, most mammogram datasets were still stored in the form of DFM. A solution for developing deep learning algorithms based on FFDM while leveraging existing labeled DFM datasets is a generative algorithm that generates FFDM from DFM. Generating high-resolution FFDM from DFM remains a challenge due to the limitations of network capacity and lacking GPU memory. METHOD: In this study, we developed a deep-learning-based generative algorithm, HRGAN, to generate synthesized FFDM (SFFDM) from DFM. More importantly, our algorithm can keep the image resolution and details while using high-resolution DFM as input. Our model used FFDM and DFM for training. First, a sliding window was used to crop DFMs and FFDMs into 256 × 256 pixels patches. Second, the patches were divided into three categories (breast, background, and boundary) by breast masks. Patches from the DFM and FFDM datasets were paired as inputs for training our model where these paired patches should be sampled from the same category of the two different image sets. U-Net liked generators and modified discriminators with two-channels output, one channel for distinguishing real and SFFDMs and the other for representing a probability map for breast mask, were used in our algorithm. Last, a study was designed to evaluate the usefulness of HRGAN. A mass segmentation task and a calcification detection task were included in the study. RESULTS: Two public mammography datasets, the CBIS-DDSM dataset and the INbreast dataset, were included in our experiment. The CBIS-DDSM dataset includes 753 calcification cases and 891 mass cases with verified pathology information, resulting in a total of 3568 DFMs. The INbreast dataset contains a total of 410 FFDMs with annotations of masses, calcifications, asymmetries, and distortions. There were 1784 DFMs and 205 FFDM randomly selected as Dataset A. The remaining DFMs from the CBIS-DDSM dataset were selected as Dataset B. The remaining FFDMs from the INbreast dataset were selected as Dataset C. All DFMs and FFDMs were normalized to 100μm × 100μm in our experiments. A study with a mass segmentation task and a calcification detection task was performed to evaluate the usefulness of HRGAN. CONCLUSIONS: The proposed HRGAN can generate high-resolution SFFDMs from DFMs. Extensive experiments showed the SFFDMs were able to help improve the performance of deep-learning-based algorithms for breast cancer screening on DFM when the size of the training dataset is small. |
format | Online Article Text |
id | pubmed-9105019 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-91050192022-05-14 Generating Full-Field Digital Mammogram From Digitized Screen-Film Mammogram for Breast Cancer Screening With High-Resolution Generative Adversarial Network Zhou, Yuanpin Wei, Jun Wu, Dongmei Zhang, Yaqin Front Oncol Oncology PURPOSE: Developing deep learning algorithms for breast cancer screening is limited due to the lack of labeled full-field digital mammograms (FFDMs). Since FFDM is a new technique that rose in recent decades and replaced digitized screen-film mammograms (DFM) as the main technique for breast cancer screening, most mammogram datasets were still stored in the form of DFM. A solution for developing deep learning algorithms based on FFDM while leveraging existing labeled DFM datasets is a generative algorithm that generates FFDM from DFM. Generating high-resolution FFDM from DFM remains a challenge due to the limitations of network capacity and lacking GPU memory. METHOD: In this study, we developed a deep-learning-based generative algorithm, HRGAN, to generate synthesized FFDM (SFFDM) from DFM. More importantly, our algorithm can keep the image resolution and details while using high-resolution DFM as input. Our model used FFDM and DFM for training. First, a sliding window was used to crop DFMs and FFDMs into 256 × 256 pixels patches. Second, the patches were divided into three categories (breast, background, and boundary) by breast masks. Patches from the DFM and FFDM datasets were paired as inputs for training our model where these paired patches should be sampled from the same category of the two different image sets. U-Net liked generators and modified discriminators with two-channels output, one channel for distinguishing real and SFFDMs and the other for representing a probability map for breast mask, were used in our algorithm. Last, a study was designed to evaluate the usefulness of HRGAN. A mass segmentation task and a calcification detection task were included in the study. RESULTS: Two public mammography datasets, the CBIS-DDSM dataset and the INbreast dataset, were included in our experiment. The CBIS-DDSM dataset includes 753 calcification cases and 891 mass cases with verified pathology information, resulting in a total of 3568 DFMs. The INbreast dataset contains a total of 410 FFDMs with annotations of masses, calcifications, asymmetries, and distortions. There were 1784 DFMs and 205 FFDM randomly selected as Dataset A. The remaining DFMs from the CBIS-DDSM dataset were selected as Dataset B. The remaining FFDMs from the INbreast dataset were selected as Dataset C. All DFMs and FFDMs were normalized to 100μm × 100μm in our experiments. A study with a mass segmentation task and a calcification detection task was performed to evaluate the usefulness of HRGAN. CONCLUSIONS: The proposed HRGAN can generate high-resolution SFFDMs from DFMs. Extensive experiments showed the SFFDMs were able to help improve the performance of deep-learning-based algorithms for breast cancer screening on DFM when the size of the training dataset is small. Frontiers Media S.A. 2022-04-29 /pmc/articles/PMC9105019/ /pubmed/35574397 http://dx.doi.org/10.3389/fonc.2022.868257 Text en Copyright © 2022 Zhou, Wei, Wu and Zhang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Zhou, Yuanpin Wei, Jun Wu, Dongmei Zhang, Yaqin Generating Full-Field Digital Mammogram From Digitized Screen-Film Mammogram for Breast Cancer Screening With High-Resolution Generative Adversarial Network |
title | Generating Full-Field Digital Mammogram From Digitized Screen-Film Mammogram for Breast Cancer Screening With High-Resolution Generative Adversarial Network |
title_full | Generating Full-Field Digital Mammogram From Digitized Screen-Film Mammogram for Breast Cancer Screening With High-Resolution Generative Adversarial Network |
title_fullStr | Generating Full-Field Digital Mammogram From Digitized Screen-Film Mammogram for Breast Cancer Screening With High-Resolution Generative Adversarial Network |
title_full_unstemmed | Generating Full-Field Digital Mammogram From Digitized Screen-Film Mammogram for Breast Cancer Screening With High-Resolution Generative Adversarial Network |
title_short | Generating Full-Field Digital Mammogram From Digitized Screen-Film Mammogram for Breast Cancer Screening With High-Resolution Generative Adversarial Network |
title_sort | generating full-field digital mammogram from digitized screen-film mammogram for breast cancer screening with high-resolution generative adversarial network |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9105019/ https://www.ncbi.nlm.nih.gov/pubmed/35574397 http://dx.doi.org/10.3389/fonc.2022.868257 |
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